RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 USE1Q9NZ43 259 aa12.81□□□□□ -0.36
TNFRSF8-203ENST00000417814 PADI4Q9UM07 663 aa12.81□□□□□ -0.36
TNFRSF8-203ENST00000417814 DCKP27707 260 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 CCR7P32248 378 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 COPZ1P61923 177 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 RFX4Q33E94 735 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 INAVAQ3KP66 663 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 LAIR1Q6GTX8 287 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 RETSATQ6NUM9 610 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF852Q6ZMS4 543 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 FAM20CQ8IXL6 584 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 GHDCQ8N2G8 530 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 OR5K1Q8NHB7 308 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 NACC2Q96BF6 587 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 MACROD1Q9BQ69 325 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 MGME1Q9BQP7 344 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 NUAK2Q9H093 628 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 CXXC1Q9P0U4 656 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 PPT2Q9UMR5 302 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 MYO15AQ9UKN7 3530 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 GLOD5A6NK44 160 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 MAGEB17A8MXT2 336 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 AOC2O75106 756 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TSC22D2O75157 780 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 PIM1P11309 404 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SDC1P18827 310 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SSTR4P31391 388 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TTKP33981 857 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 MAPKAPK2P49137 400 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 FCGRTP55899 365 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF33AQ06730 810 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 CNTN1Q12860 1018 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF846Q147U1 533 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SPDYE7PQ495Y7 208 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 PRSS36Q5K4E3 855 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 NAGSQ8N159 534 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 OR4A15Q8NGL6 344 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 KAT2AQ92830 837 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 VPS35Q96QK1 796 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 PKMYT1Q99640 499 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 NEURL2Q9BR09 285 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TNFRSF11BO00300 401 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SSX4O60224 188 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF623O75123 536 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 GALTP07902 379 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF12P17014 697 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TCEA1P23193 301 aaKnown RBP12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 S100A1P23297 94 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ETV3P41162 512 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 CSNK1DP48730 415 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ATP4BP51164 291 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 GALNT1Q10472 559 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 DEF8Q6ZN54 512 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SIX5Q8N196 739 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 ING5Q8WYH8 240 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 RHBDF1Q96CC6 855 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 C8orf48Q96LL4 319 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SH3GL1Q99961 368 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 APOL4Q9BPW4 351 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TPT1P8Q9HAU6 139 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TIGARQ9NQ88 270 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 SIRT5Q9NXA8 310 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 TRPC4Q9UBN4 977 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 IL20RAQ9UHF4 553 aa12.8□□□□□ -0.36
TNFRSF8-203ENST00000417814 LRRTM2O43300 516 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 SUV39H1O43463 412 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 TULP3O75386 442 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZFP36L2P47974 494 aaKnown RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 RNASE12Q5GAN4 147 aaKnown RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 SLC34A3Q8N130 599 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZFP41Q8N8Y5 198 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 CIDECQ96AQ7 238 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 UHRF1Q96T88 793 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 NUSAP1Q9BXS6 441 aaKnown RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ATP13A3Q9H7F0 1226 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 PALMDQ9NP74 551 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 SNTG1Q9NSN8 517 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 CLEC4AQ9UMR7 237 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 FAM92AA1XBS5 289 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 WASHC1A8K0Z3 465 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 CTDSP2O14595 271 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 AREL1O15033 823 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 PCDH7O60245 1069 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 OAZ2O95190 189 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 SNX4O95219 450 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 IL6P05231 212 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 HOXC13P31276 330 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 KRT20P35900 424 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 CSRP3P50461 194 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 GPR17Q13304 367 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ACOX1Q15067 660 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 TIGD6Q17RP2 521 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 NOXRED1Q6NXP6 359 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 WASH2PQ6VEQ5 465 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF605Q86T29 641 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZSWIM9Q86XI8 627 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms