RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZBTB20Q9HC78 741 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 ABCF3Q9NUQ8 709 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 ASIC3Q9UHC3 531 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 PCYOX1Q9UHG3 505 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 TRMT6Q9UJA5 497 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 C3orf18Q9UK00 162 aa16.75■□□□□ 0.27
PDLIM2-208ENST00000416159 MAP2K7O14733 419 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 ALOX12BO75342 701 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 HPP00738 406 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 ACPPP15309 386 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 HRH2P25021 359 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 IMPA1P29218 277 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 RGS4P49798 205 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 DSG2Q14126 1118 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 CRYMQ14894 314 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 HKDC1Q2TB90 917 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 VWA2Q5GFL6 755 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 ATG9BQ674R7 924 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 IGFL2Q6UWQ7 119 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 PIWIL4Q7Z3Z4 852 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 ADCK2Q7Z695 626 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 PRSS58Q8IYP2 241 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 PPP4R1Q8TF05 950 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 C19orf60Q96EN9 201 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 WDR77Q9BQA1 342 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 NAT9Q9BTE0 207 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 YIPF2Q9BWQ6 316 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 TMEM184CQ9NVA4 438 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 C14orf105Q9NVL8 296 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 ASF1BQ9NVP2 202 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 TAS2R13Q9NYV9 303 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 TRPC4Q9UBN4 977 aa16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 COPG1Q9Y678 874 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-208ENST00000416159 C8GP07360 202 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 ANXA5P08758 320 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 TCP1P17987 556 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 GLRBP48167 497 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 EMP2P54851 167 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 DHX9Q08211 1270 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 FAM53BQ14153 422 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 NDUFA9Q16795 377 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 CRB2Q5IJ48 1285 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 SPANXN3Q5MJ09 141 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 PALM2Q8IXS6 379 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 SLCO2A1Q92959 643 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 MMABQ96EY8 250 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 THOC3Q96J01 351 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 CCDC138Q96M89 665 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 PCBD2Q9H0N5 130 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 EPS8L2Q9H6S3 715 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 MKKSQ9NPJ1 570 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 CCDC177Q9NQR7 707 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 CUEDC1Q9NWM3 386 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 TRMT1Q9NXH9 659 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 RELNP78509 3460 aa16.73■□□□□ 0.27
PDLIM2-208ENST00000416159 ICE1Q9Y2F5 2266 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 H7BY64 318 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 PCDH17O14917 1159 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 HAT1O14929 419 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 FOXS1O43638 330 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 CXCR2P25025 360 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 SLC26A3P40879 764 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 MRPL49Q13405 166 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 EIF2S3LQ2VIR3 472 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 KIAA0408Q6ZU52 694 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 NDUFAF7Q7L592 441 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 CUZD1Q86UP6 607 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 LAPTM4BQ86VI4 370 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 SPNS2Q8IVW8 549 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 DNAJB14Q8TBM8 379 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 SSC4DQ8WTU2 575 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 EEF1AKMT1Q8WVE0 214 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 PRAP1Q96NZ9 151 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 LMF1Q96S06 567 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 TGIF2Q9GZN2 237 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 DRC3Q9H069 523 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 SYNPO2LQ9H987 977 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 PCDHGA10Q9Y5H3 936 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 SPTBN1Q01082 2364 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 NAV2Q8IVL1 2488 aa16.72■□□□□ 0.27
PDLIM2-208ENST00000416159 USP9XQ93008 2570 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 A0A0A6YYC8 382 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 IDSB3KWA1 339 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 I3L1I5 382 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 SLC16A5O15375 505 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 CBX6O95503 412 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 HEXBP07686 556 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 GABRB3P28472 473 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 TIAL1Q01085 375 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 Q0VFX4 171 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 SP140Q13342 867 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 NR6A1Q15406 480 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 HIF1AQ16665 826 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 BBS9Q3SYG4 887 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 ISLR2Q6UXK2 745 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 PLD3Q8IV08 490 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 CNTN4Q8IWV2 1026 aa16.71■□□□□ 0.27
PDLIM2-208ENST00000416159 MYO1HQ8N1T3 1032 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms