RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 PKLRP30613 574 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 CASQ1P31415 396 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 PTGER4P35408 488 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 OR1D4P47884 311 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 BBS9Q3SYG4 887 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 ZC3H12BQ5HYM0 836 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 UGT3A1Q6NUS8 523 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 BNC2Q6ZN30 1099 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 OR2L8Q8NGY9 312 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 NR4A3Q92570 626 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 SLCO2A1Q92959 643 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 IL17FQ96PD4 163 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 ZNF160Q9HCG1 818 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 FBXO6Q9NRD1 293 aaPredicted RBP12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 FAM114A2Q9NRY5 505 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 SEMA3GQ9NS98 782 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 IARS2Q9NSE4 1012 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 SNRNP200O75643 2136 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-202ENST00000415886 TRGV8A0A0C4DH27 118 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 ZNF839A8K0R7 811 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 CATP04040 527 aaKnown RBP12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 COX6B1P14854 86 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 HTR1EP28566 365 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 ATP5DP30049 168 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 HSD17B2P37059 387 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 GRIA3P42263 894 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 MAGEA3P43357 314 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 ARG2P78540 354 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 SRSF11Q05519 484 aaKnown RBP12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 TSTA3Q13630 321 aaPredicted RBP12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 KLHL38Q2WGJ6 581 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 SPANXN3Q5MJ09 141 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 MRGPRGQ86SM5 289 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 PALM2Q8IXS6 379 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 DENND1AQ8TEH3 1009 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 ZUFSPQ96AP4 578 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 C8orf44Q96CB5 159 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 LMF1Q96S06 567 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 EBNA1BP2Q99848 306 aaKnown RBP12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 CRB3Q9BUF7 120 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 TRIM8Q9BZR9 551 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 PLA2G3Q9NZ20 509 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 SUCOQ9UBS9 1254 aaKnown RBP12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 SH3BGRL2Q9UJC5 107 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 FBXO5Q9UKT4 447 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 MAU2Q9Y6X3 613 aa12.61□□□□□ -0.39
CTHRC1-202ENST00000415886 PDZD2O15018 2839 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 VSTM2BA6NLU5 285 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 CCL21O00585 134 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ZBTB14O43829 449 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 VPS26AO75436 327 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 HAUS5O94927 633 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 UNC5CO95185 931 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 FKBP9O95302 570 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 SYF2O95926 243 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 HPP00738 406 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 F10P00742 488 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ERVK-10P10266 1014 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ACPPP15309 386 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 SKIV2L2P42285 1042 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 BDKRB1P46663 353 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ARL4CP56559 192 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 KLC1Q07866 573 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ZNF630Q2M218 657 aaPredicted RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ACSBG2Q5FVE4 666 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 PRSS58Q8IYP2 241 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ZNF808Q8N4W9 903 aaPredicted RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 TTC29Q8NA56 475 aaPredicted RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 OR9A1PQ8NGU1 263 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 KRT12Q99456 494 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 UTP6Q9NYH9 597 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 PTGFRNQ9P2B2 879 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 KLHL42Q9P2K6 505 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 ZC3H7BQ9UGR2 993 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 RUVBL2Q9Y230 463 aaKnown RBP12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 APCP25054 2843 aa12.6□□□□□ -0.39
CTHRC1-202ENST00000415886 DYTNA2CJ06 578 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 PABPN1LA6NDY0 278 aaKnown RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 EFCAB8A8MWE9 144 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 TARM1B6A8C7 271 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 MAP2K7O14733 419 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 TTI1O43156 1089 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 MED26O95402 600 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 MATN4O95460 622 aa12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 ENO3P13929 434 aaPredicted RBP12.59□□□□□ -0.39
CTHRC1-202ENST00000415886 MST1P26927 711 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms