RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 EGLN2Q96KS0 407 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PANX3Q96QZ0 392 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ACOX2Q99424 681 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 RTP3Q9BQQ7 232 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PRRG4Q9BZD6 226 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PORCNQ9H237 461 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NOL11Q9H8H0 719 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 AKIRIN1Q9H9L7 192 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 SMPD3Q9NY59 655 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 DNPEPQ9ULA0 475 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 FZD4Q9ULV1 537 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NSG2Q9Y328 171 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ANGPTL3Q9Y5C1 460 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 UBE4BO95155 1302 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 BDP1A6H8Y1 2624 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 LAMA4Q16363 1823 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MTCL1Q9Y4B5 1905 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 TMEM247A6NEH6 219 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MFSD2BA6NFX1 497 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 A6NNC1 897 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 J3QR06 171 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 JRKO75564 520 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZNF202O95125 648 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CCDC192P0DO97 292 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CSF2RAP15509 400 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 YWHAQP27348 245 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SFNP31947 248 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 KCNJ4P48050 445 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZNF84P51523 738 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZNF75DP51815 510 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PRKCEQ02156 737 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 TSTA3Q13630 321 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZNF385BQ569K4 471 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SP5Q6BEB4 398 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 SULT1C3Q6IMI6 304 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 FAM198BQ6UWH4 519 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 HTR3DQ70Z44 454 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 LAS2Q8IYD9 372 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 OR7G3Q8NG95 312 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 OR10S1Q8NGN2 331 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NCOA7Q8NI08 942 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 RNF183Q96D59 192 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DAZAP1Q96EP5 407 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 C8orf76Q96K31 380 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PBKQ96KB5 322 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 HARBI1Q96MB7 349 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 FCRL4Q96PJ5 515 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ALG8Q9BVK2 526 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SLC2A11Q9BYW1 496 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 EHD1Q9H4M9 534 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 GORASP2Q9H8Y8 452 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NMRK1Q9NWW6 199 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SNX9Q9Y5X1 595 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 WDR19Q8NEZ3 1342 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 A0A1W2PPW3 197 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MEX3AA1L020 520 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 STMND1H3BQB6 276 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ADAM10O14672 748 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CASQ2O14958 399 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 AKAP8O43823 692 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 GSRP00390 522 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ASNSP08243 561 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 KRT13P13646 458 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ETS1P14921 441 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 VCLP18206 1134 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 TACR3P29371 465 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 AKT2P31751 481 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 IL24Q13007 206 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 OLIG2Q13516 323 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 BTG3Q14201 252 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 CCDC40Q4G0X9 1142 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PAPPA-AS1Q5QFB9 102 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 DENND2CQ68D51 928 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PMF1Q6P1K2 205 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CES3Q6UWW8 571 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 PQLC2Q6ZP29 291 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 VASH2Q86V25 355 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 APCDD1Q8J025 514 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 KBTBD8Q8NFY9 601 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 OR2AK2Q8NG84 335 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 OSR1Q8TAX0 266 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 PROKR1Q8TCW9 393 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SGCDQ92629 289 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 APOLD1Q96LR9 279 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 CDCA3Q99618 268 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 CCDC3Q9BQI4 270 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ZSCAN5AQ9BUG6 496 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 LRRCC1Q9C099 1032 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 ACTR5Q9H9F9 607 aaPredicted RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 HINT3Q9NQE9 182 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 PDGFCQ9NRA1 345 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 GDAP2Q9NXN4 497 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 NDRG3Q9UGV2 375 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 SH2B3Q9UQQ2 575 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 TDRKHQ9Y2W6 561 aaKnown RBP2.47□□□□□ -2.01
MCF2-204ENST00000414978 IKBKGQ9Y6K9 419 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 MYH15Q9Y2K3 1946 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 C2orf16Q68DN1 1984 aa2.47□□□□□ -2.01
MCF2-204ENST00000414978 TRIP12Q14669 1992 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 TTC41PQ6P2S7 1318 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms