RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 XRCC1P18887 633 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 RPL14P50914 215 aaKnown RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 RAB28P51157 221 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 HLA-BQ31612 363 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 VWA5B1Q5TIE3 1220 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 TCEAL6Q6IPX3 200 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 GATAD2AQ86YP4 633 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 TRIM48Q8IWZ4 208 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 SNX31Q8N9S9 440 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 OR4F6Q8NGB9 312 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 OR4E2Q8NGC2 313 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 MAPK15Q8TD08 544 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 TCEAL3Q969E4 200 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 ATP6V1E2Q96A05 226 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 SGPP1Q9BX95 441 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 EML4Q9HC35 981 aaKnown RBP14.99□□□□□ -0.01
SHMT2-202ENST00000414700 S100A14Q9HCY8 104 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 DNAJC11Q9NVH1 559 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 POLG2Q9UHN1 485 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 TIMM22Q9Y584 194 aa14.99□□□□□ -0.01
SHMT2-202ENST00000414700 A0A1W2PPV9 198 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 E7EQ34 232 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 ZNF195O14628 629 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 NOBOXO60393 691 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 NPPBP16860 134 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 PKLRP30613 574 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 CHN2P52757 468 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 TBCCQ15814 346 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 CYP2A13Q16696 494 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 TCHHL1Q5QJ38 904 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-202ENST00000414700 NEIL2Q969S2 332 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 ZNF382Q96SR6 550 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 KLHL4Q9C0H6 718 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 ARRDC1-AS1Q9H2J1 176 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 KCNK4Q9NYG8 393 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 PTGDR2Q9Y5Y4 395 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 RP1P56715 2156 aa14.98□□□□□ -0.01
SHMT2-202ENST00000414700 KIR2DS5A0A0G2JLQ3 304 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 A0A0G2JNG1 304 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 KIR2DS3K7RE56 304 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ESRRBO95718 433 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 MLYCDO95822 493 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 VIPP01282 170 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 HOXD12P35452 270 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 RXRGP48443 463 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 PIK3CGP48736 1102 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ARRB1P49407 418 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 HHEXQ03014 270 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 KIR2DS5Q14953 304 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 UGT3A2Q3SY77 523 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 SFT2D3Q587I9 215 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 CAPN13Q6MZZ7 669 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 METTL2BQ6P1Q9 378 aaKnown RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 GPRIN3Q6ZVF9 776 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ALYREFQ86V81 257 aaKnown RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 TREML1Q86YW5 311 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 WDR75Q8IWA0 830 aaKnown RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 FAM20CQ8IXL6 584 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ALDH16A1Q8IZ83 802 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 CDYL2Q8N8U2 506 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 FBXO27Q8NI29 283 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 EBF4Q9BQW3 602 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 THTPAQ9BU02 230 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 GAREM1Q9H706 876 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 TIMMDC1Q9NPL8 285 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 CCDC177Q9NQR7 707 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 SPHK1Q9NYA1 384 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 TRAF6Q9Y4K3 522 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 hCG_2014768A0A024R1R8 64 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 A0A1B0GTQ1 180 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 MATN2O00339 956 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 PPM1DO15297 605 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 OR6B1O95007 311 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ANXA6P08133 673 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 CD22P20273 847 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 NDUFS1P28331 727 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 PEBP1P30086 187 aaKnown RBP14.97□□□□□ -0.01
SHMT2-202ENST00000414700 MPLP40238 635 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 AQP5P55064 265 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ARHGAP19Q14CB8 494 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 PLCL1Q15111 1095 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 PDK3Q15120 406 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 ZNF423Q2M1K9 1284 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 SLC23A3Q6PIS1 610 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 KLHDC8AQ8IYD2 350 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 LCN9Q8WX39 176 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 CLPTM1LQ96KA5 538 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 LRFN3Q9BTN0 628 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 NUF2Q9BZD4 464 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 C1orf21Q9H246 121 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 SPATA7Q9P0W8 599 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 TAC3Q9UHF0 121 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 DNAJC15Q9Y5T4 150 aa14.97□□□□□ -0.01
SHMT2-202ENST00000414700 EP300Q09472 2414 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-202ENST00000414700 OTOGLQ3ZCN5 2332 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 OR5K4A6NMS3 321 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 OTCP00480 354 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 SMIM18P0DKX4 95 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 MYF5P13349 255 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms