RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TUBB4AP04350 444 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 ENO2P09104 434 aaPredicted RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 GSTA2P09210 222 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 ZNF37AP17032 561 aaPredicted RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 ITGAXP20702 1163 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 GRK3P35626 688 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 GCGRP47871 477 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 PGGT1BP53609 377 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 RELAQ04206 551 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 OCA2Q04671 838 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 ATP1A4Q13733 1029 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 PHKG1Q16816 387 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 WHAMMP3Q1A5X7 153 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 CPZQ66K79 652 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 ZNF425Q6IV72 752 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 CAPN13Q6MZZ7 669 aaPredicted RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 PRMT9Q6P2P2 845 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 MBOAT1Q6ZNC8 495 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 ASB18Q6ZVZ8 466 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 C17orf64Q86WR6 236 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 CTAGE3PQ8IX95 158 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 LRRC56Q8IYG6 542 aaPredicted RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 METTL27Q8N6F8 245 aaPredicted RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 TEX19Q8NA77 164 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 CLEC1AQ8NC01 280 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 FBXO25Q8TCJ0 367 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 TSPAN17Q96FV3 270 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 PDLIM5Q96HC4 596 aaKnown RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 VPS50Q96JG6 964 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 FER1L6-AS2Q96M78 137 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 HAUS8Q9BT25 410 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 YIPF2Q9BWQ6 316 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 TRIM55Q9BYV6 548 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 PHACTR1Q9C0D0 580 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 WDR54Q9H977 334 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 GPAMQ9HCL2 828 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 ANAPC2Q9UJX6 822 aa10.7□□□□□ -0.7
RFFL-204ENST00000414419 NXT1Q9UKK6 140 aaKnown RBP10.7□□□□□ -0.7
RFFL-204ENST00000414419 A6NL46 340 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 HAT1O14929 419 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 TSPAN12O95859 305 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 ONECUT2O95948 504 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 ANXA5P08758 320 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 FBLP22087 321 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 MAGEA4P43358 317 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 PGDP52209 483 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 EMP3P54852 163 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 TAS2R39P59534 338 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 RPS15AP62244 130 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 SLC7A5Q01650 507 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 POU4F1Q01851 419 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 KLRB1Q12918 225 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 NKG7Q16617 165 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 NDUFA9Q16795 377 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 HKDC1Q2TB90 917 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 PRTGQ2VWP7 1150 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 GARNL3Q5VVW2 1013 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 LCTLQ6UWM7 567 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 FRA10AC1Q70Z53 315 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 CYS1Q717R9 158 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 MRGPREQ86SM8 312 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 PLD3Q8IV08 490 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 TBC1D19Q8N5T2 526 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 MNS1Q8NEH6 495 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 ANKRD7Q92527 254 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 NACC2Q96BF6 587 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 TRIM44Q96DX7 344 aaPredicted RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 MVB12AQ96EY5 273 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 OR2A5Q96R48 311 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 CPNE1Q99829 537 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 SLC26A1Q9H2B4 701 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 POPDC3Q9HBV1 291 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 SLC22A11Q9NSA0 550 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 P4HTMQ9NXG6 502 aa10.69□□□□□ -0.7
RFFL-204ENST00000414419 ZNF282Q9UDV7 671 aaPredicted RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 NOVA2Q9UNW9 492 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 RUVBL1Q9Y265 456 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 PCDHGA9Q9Y5G4 932 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 GCN1Q92616 2671 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 HELZ2Q9BYK8 2649 aaKnown RBP10.69□□□□□ -0.7
RFFL-204ENST00000414419 DOCK10Q96BY6 2186 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 TCRBV9S1A1TA0A576 114 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 KIF2AO00139 706 aaPredicted RBP10.68□□□□□ -0.7
RFFL-204ENST00000414419 KLHL41O60662 606 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 CNOT3O75175 753 aaKnown RBP10.68□□□□□ -0.7
RFFL-204ENST00000414419 PIAS1O75925 651 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 NR1D1P20393 614 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 MMP11P24347 488 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 STX2P32856 288 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 SPRP35270 261 aaPredicted RBP10.68□□□□□ -0.7
RFFL-204ENST00000414419 GP5P40197 560 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 AVPR1BP47901 424 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 GUCY2DQ02846 1103 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 ZNF460Q14592 562 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 USP10Q14694 798 aaKnown RBP10.68□□□□□ -0.7
RFFL-204ENST00000414419 RBBP7Q16576 425 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 TMEM207Q6UWW9 146 aa10.68□□□□□ -0.7
RFFL-204ENST00000414419 CEP128Q6ZU80 1094 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms