RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 MINDY1Q8N5J2 469 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 OR9I1Q8NGQ6 314 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 TWIST2Q8WVJ9 160 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 NSUN5Q96P11 429 aaKnown RBP9.63□□□□□ -0.87
DDB1-202ENST00000414411 MID1IP1Q9NPA3 183 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 PARD6AQ9NPB6 346 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 ADA2Q9NZK5 511 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 RIMS3Q9UJD0 308 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 HCN4Q9Y3Q4 1203 aa9.63□□□□□ -0.87
DDB1-202ENST00000414411 PRSS51A0A1B0GVH4 220 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 OR5K4A6NMS3 321 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 OR52A4PA6NMU1 304 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SYCE1LA8MT33 242 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PDZK1P1A8MUH7 402 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 E7ENX8 843 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 CDC7O00311 574 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 CDX4O14627 284 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 MRASO14807 208 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PIP5K1BO14986 540 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 KIF1CO43896 1103 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 ANXA6P08133 673 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 RPS17P08708 135 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 SLC35G4P0C7Q5 338 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 UQCRBP14927 111 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 EEF1DP29692 281 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 SLC19A1P41440 591 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 CCT8P50990 548 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 FOXA1P55317 472 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 STX1BP61266 288 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 LCP2Q13094 533 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TSNQ15631 228 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 RPE65Q16518 533 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 DEFB133Q30KQ1 61 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 GRAMD1BQ3KR37 738 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 C8orf82Q6P1X6 216 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 SBSNQ6UWP8 590 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 UNC5DQ6UXZ4 953 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 HACD2Q6Y1H2 254 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 GATAD2AQ86YP4 633 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 MYO1HQ8N1T3 1032 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SFRP1Q8N474 314 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SNX31Q8N9S9 440 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 FAM156AQ8NDB6 213 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TRPC4APQ8TEL6 797 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TFGQ92734 400 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 BTBD9Q96Q07 612 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 GTPBP2Q9BX10 602 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 SLC12A9Q9BXP2 914 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 AKTIPQ9H8T0 292 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SPAG4Q9NPE6 437 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 RXFP3Q9NSD7 469 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 DTNAQ9Y4J8 743 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SPEGQ15772 3267 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 KIR2DS5A0A0G2JLQ3 304 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 A0A0G2JNG1 304 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 NPEPPSL1A6NEC2 478 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 KIR2DS3K7RE56 304 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 IFRD1O00458 451 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 STX16O14662 325 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SLC16A5O15375 505 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 KLK8O60259 260 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 NOBOXO60393 691 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 NRP2O60462 931 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 C1orf105O95561 183 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 C8GP07360 202 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TCN1P20061 433 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 GPX3P22352 226 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 MAPK9P45984 424 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 NHLH1Q02575 133 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 CLCQ05315 142 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TRIM25Q14258 630 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 KIR2DS5Q14953 304 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PHKG1Q16816 387 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PAOXQ6QHF9 649 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 FUNDC1Q8IVP5 155 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 FBXO15Q8NCQ5 510 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 ICA1LQ8NDH6 482 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PHC3Q8NDX5 983 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 GPR156Q8NFN8 814 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 OR5K2Q8NHB8 316 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 SKA2Q8WVK7 121 aaPredicted RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 PATE1Q8WXA2 126 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 C12orf66Q96MD2 445 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 KCNA7Q96RP8 456 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 C1QTNF3Q9BXJ4 246 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TUBB1Q9H4B7 451 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 NLGN3Q9NZ94 848 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PDP2Q9P2J9 529 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 NCDNQ9UBB6 729 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 PCDHGB2Q9Y5G2 931 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 PTGDR2Q9Y5Y4 395 aa9.62□□□□□ -0.87
DDB1-202ENST00000414411 CFAP20Q9Y6A4 193 aaKnown RBP9.62□□□□□ -0.87
DDB1-202ENST00000414411 PCNX2A6NKB5 2137 aa9.61□□□□□ -0.87
DDB1-202ENST00000414411 TRBV23OR9-2A0A075B6M9 112 aa9.61□□□□□ -0.87
DDB1-202ENST00000414411 A0A1B0GTL3 188 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms