RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SF1Q15637 639 aaKnown RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 LONRF1Q17RB8 773 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 MUM1Q2TAK8 710 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 PRTGQ2VWP7 1150 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 CCDC181Q5TID7 509 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 BBS12Q6ZW61 710 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 SPPL2CQ8IUH8 684 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 MMP21Q8N119 569 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 MDS2Q8NDY4 140 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 LKAAEAR1Q8TD35 194 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 PHF10Q8WUB8 498 aaKnown RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 ZUFSPQ96AP4 578 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 IMMP1LQ96LU5 166 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 SPATA13Q96N96 652 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 DMRTA2Q96SC8 542 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 TMEM121Q9BTD3 319 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 TMUB1Q9BVT8 246 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 OSBPL8Q9BZF1 889 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 TSPAN10Q9H1Z9 355 aaPredicted RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 HOMER3Q9NSC5 361 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 TRPC4Q9UBN4 977 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 ZC3H7BQ9UGR2 993 aaKnown RBP9.07□□□□□ -0.96
RFFL-203ENST00000413582 PCDHGB6Q9Y5F9 930 aa9.07□□□□□ -0.96
RFFL-203ENST00000413582 A0A0J9YVX5 310 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 ASPDHA6ND91 283 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 FAM227AF5H4B4 570 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 CCDC188H7C350 402 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 CEP104O60308 925 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 OR1I1O60431 355 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 SLU7O95391 586 aaKnown RBP9.06□□□□□ -0.96
RFFL-203ENST00000413582 RPN2P04844 631 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 EIF2S1P05198 315 aaKnown RBP9.06□□□□□ -0.96
RFFL-203ENST00000413582 OR56A5P0C7T3 313 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 MYBL2P10244 700 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 CCR7P32248 378 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 AP2B1P63010 937 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 POU6F1Q14863 301 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 KRTCAP3Q53RY4 240 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 KCTD11Q693B1 232 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 TMEM205Q6UW68 189 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 UNC5DQ6UXZ4 953 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 SIAH3Q8IW03 269 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 CHERPQ8IWX8 916 aaKnown RBP9.06□□□□□ -0.96
RFFL-203ENST00000413582 BEST3Q8N1M1 668 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 AMER3Q8N944 861 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 OR2L3Q8NG85 312 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 ACTL9Q8TC94 416 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 AGAP11Q8TF27 550 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 STYXQ8WUJ0 223 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 MVB12AQ96EY5 273 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 FRMD6Q96NE9 622 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 MIPEPQ99797 713 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 RAB11FIP5Q9BXF6 653 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 HEMGNQ9BXL5 484 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 HES7Q9BYE0 225 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 FRMD8P1Q9BZ68 369 aaPredicted RBP9.06□□□□□ -0.96
RFFL-203ENST00000413582 SYNPO2LQ9H987 977 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 TEKT2Q9UIF3 430 aa9.06□□□□□ -0.96
RFFL-203ENST00000413582 GOLGA6L10A0A0M3HER8 536 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 OR2A25A4D2G3 310 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CTAGE15A4D2H0 777 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 KRT87PA6NCN2 255 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 MROH6A6NGR9 719 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 NPIPA5E9PKD4 350 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 E9PLN8 166 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 ADAM10O14672 748 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TTI1O43156 1089 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 PRPF4O43172 522 aaKnown RBP eCLIP9.05□□□□□ -0.96
RFFL-203ENST00000413582 ZNHIT1O43257 154 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 GPC4O75487 556 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TJP3O95049 919 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 HEXBP07686 556 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CTAGE8P0CG41 777 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 ERVK-10P10266 1014 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 ICAM2P13598 275 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CD99P14209 185 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TPH1P17752 444 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CXCR5P32302 372 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SLC26A3P40879 764 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TERF1P54274 439 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 EMP3P54852 163 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 ALDH6A1Q02252 535 aaKnown RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 HSPA14Q0VDF9 509 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 KLF1Q13351 362 aaPredicted RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 TUBA3CQ13748 450 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 FCRLBQ6BAA4 426 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 TUBA3EQ6PEY2 450 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CTAGE6Q86UF2 777 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SLC13A5Q86YT5 568 aaPredicted RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 CDKL3Q8IVW4 592 aaPredicted RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 ZC3H7AQ8IWR0 971 aaKnown RBP9.05□□□□□ -0.96
RFFL-203ENST00000413582 CTAGE4Q8IX94 777 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
RFFL-203ENST00000413582 CFAP61Q8NHU2 1237 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SDCCAG3Q96C92 435 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SCMH1Q96GD3 660 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 CABS1Q96KC9 395 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 RUNDC3BQ96NL0 473 aa9.05□□□□□ -0.96
RFFL-203ENST00000413582 SIGLEC12Q96PQ1 595 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms