RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PLXNA4Q9HCM2 1894 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 PSMD11O00231 422 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 RCVRNP35243 200 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 OLR1P78380 273 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 SMARCB1Q12824 385 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 ZNF783Q6ZMS7 281 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 DENND1CQ8IV53 801 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 TCAIMQ8N3R3 496 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 CLDN19Q8N6F1 224 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 L3MBTL4Q8NA19 623 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 PANX1Q96RD7 426 aa17.09■□□□□ 0.33
SDCBP-202ENST00000413219 FAM120CQ9NX05 1096 aaKnown RBP17.09■□□□□ 0.33
SDCBP-202ENST00000413219 MAGEB17A8MXT2 336 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 LOC110117498-PIK3R3F6TDL0 507 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 APOA1P02647 267 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 AMD1P17707 334 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 C21orf33P30042 268 aaPredicted RBP17.08■□□□□ 0.33
SDCBP-202ENST00000413219 CA5AP35218 305 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 BMPR1AP36894 532 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 SLC19A1P41440 591 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 GPR17Q13304 367 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 CLLU1OSQ5K130 101 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 ARMC12Q5T9G4 340 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 THOC7Q6I9Y2 204 aaKnown RBP17.08■□□□□ 0.33
SDCBP-202ENST00000413219 CXorf57Q6NSI4 855 aaKnown RBP17.08■□□□□ 0.33
SDCBP-202ENST00000413219 CCBE1Q6UXH8 406 aaPredicted RBP17.08■□□□□ 0.33
SDCBP-202ENST00000413219 SYNPOQ8N3V7 929 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 ZNF675Q8TD23 568 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 ATL1Q8WXF7 558 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 PIK3R3Q92569 461 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 GGHQ92820 318 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 PLD4Q96BZ4 506 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 MYO19Q96H55 970 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 CRELD1Q96HD1 420 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 REXO4Q9GZR2 422 aaKnown RBP17.08■□□□□ 0.33
SDCBP-202ENST00000413219 CRISPLD1Q9H336 500 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 KCTD5Q9NXV2 234 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 PADI2Q9Y2J8 665 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 PCDHGB6Q9Y5F9 930 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 KLK4Q9Y5K2 254 aa17.08■□□□□ 0.33
SDCBP-202ENST00000413219 SCAMP3O14828 347 aaKnown RBP17.08■□□□□ 0.32
SDCBP-202ENST00000413219 SCN2BO60939 215 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 GTF2E2P29084 291 aaKnown RBP17.08■□□□□ 0.32
SDCBP-202ENST00000413219 SGSHP51688 502 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 UGT2B15P54855 530 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 ARPP19P56211 112 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 EIF4HQ15056 248 aaKnown RBP17.08■□□□□ 0.32
SDCBP-202ENST00000413219 GPR33Q49SQ1 333 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 PDE12Q6L8Q7 609 aaKnown RBP17.08■□□□□ 0.32
SDCBP-202ENST00000413219 NOXRED1Q6NXP6 359 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 MBOAT1Q6ZNC8 495 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 GDPD3Q7L5L3 318 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 SYTL1Q8IYJ3 562 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 SLC22A15Q8IZD6 547 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 PAF1Q8N7H5 531 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 PIH1D2Q8WWB5 315 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 CAPSLQ8WWF8 208 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 APIPQ96GX9 242 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 MAGEB10Q96LZ2 347 aaPredicted RBP17.08■□□□□ 0.32
SDCBP-202ENST00000413219 NEK6Q9HC98 313 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 NOD1Q9Y239 953 aa17.08■□□□□ 0.32
SDCBP-202ENST00000413219 SLC38A8A6NNN8 435 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 A8MU76 341 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 EIF3FO00303 357 aaPredicted RBP17.07■□□□□ 0.32
SDCBP-202ENST00000413219 PLK4O00444 970 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 LRATO95237 230 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 VNN2O95498 520 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 ALPIP09923 528 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 ALOX12P18054 663 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 WNT3P56703 355 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 C21orf58P58505 322 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 RHOAP61586 193 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 AP1S1P61966 158 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 KCNJ10P78508 379 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 CARTPTQ16568 116 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 AGAP6Q5VW22 663 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 GPR153Q6NV75 609 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 GALNT10Q86SR1 603 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 CCDC103Q8IW40 242 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 IL17RDQ8NFM7 739 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 OR8J2Q8NGG1 315 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 EGLN2Q96KS0 407 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 APOLD1Q96LR9 279 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 AGAP4Q96P64 663 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 ZFYVE1Q9HBF4 777 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 IL26Q9NPH9 171 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 ADPRHL2Q9NX46 363 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 DOCK3Q8IZD9 2030 aa17.07■□□□□ 0.32
SDCBP-202ENST00000413219 VIPP01282 170 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 TCEA1P23193 301 aaKnown RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 PTX3P26022 381 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 RPIAP49247 311 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 IRF3Q14653 427 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 UGT8Q16880 541 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms