RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 WASP42768 502 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 UGT2B15P54855 530 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 ABRQ12979 859 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 DUSP6Q16828 381 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 INAVAQ3KP66 663 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PIK3R6Q5UE93 754 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 FAM124AQ86V42 546 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 CLEC4CQ8WTT0 213 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 RBPMSQ93062 196 aaKnown RBP8.3□□□□□ -1.08
PBRM1-209ENST00000412587 TMBIM1Q969X1 311 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PPP3R2Q96LZ3 170 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 GATA5Q9BWX5 397 aaPredicted RBP8.3□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF436Q9C0F3 470 aaPredicted RBP8.3□□□□□ -1.08
PBRM1-209ENST00000412587 SLC6A17Q9H1V8 727 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 NANOGQ9H9S0 305 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 MCCC2Q9HCC0 563 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 DUS2Q9NX74 493 aaKnown RBP8.3□□□□□ -1.08
PBRM1-209ENST00000412587 ADGRE2Q9UHX3 823 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 CA5BQ9Y2D0 317 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PRSS51A0A1B0GVH4 220 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 A8MUA0 341 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 AP3D1O14617 1153 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 AP2A1O95782 977 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 EPHX1P07099 455 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 NR2F6P10588 404 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 GSTM5P46439 218 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PRKG2Q13237 762 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 NDUFAF6Q330K2 333 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 UAP1L1Q3KQV9 507 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 SPATS1Q496A3 300 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 CDC73Q6P1J9 531 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 CMC1Q7Z7K0 106 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 CFAP206Q8IYR0 622 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PIAS4Q8N2W9 510 aaPredicted RBP8.3□□□□□ -1.08
PBRM1-209ENST00000412587 OR2T12Q8NG77 320 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PCDH19Q8TAB3 1148 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 NDNFQ8TB73 568 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 HEXDCQ8WVB3 486 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 GATAD2BQ8WXI9 593 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 MTFMTQ96DP5 389 aaKnown RBP8.3□□□□□ -1.08
PBRM1-209ENST00000412587 LINGO1Q96FE5 620 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 SLC29A1Q99808 456 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 PCDHGA8Q9Y5G5 932 aa8.3□□□□□ -1.08
PBRM1-209ENST00000412587 GSAPA4D1B5 854 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 hCG_2039718K7EN88 272 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 IRAK2O43187 625 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ULK1O75385 1050 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 RPP40O75818 363 aaKnown RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SLC22A5O76082 557 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 JUPP14923 745 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 DSG2Q14126 1118 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PITRM1Q5JRX3 1037 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ANKRD22Q5VYY1 191 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TAPT1Q6NXT6 567 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 DNAJB7Q7Z6W7 309 aaPredicted RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 CPSF7Q8N684 471 aaKnown RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TTC9Q92623 222 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 C1GALT1C1Q96EU7 318 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 FAM129BQ96TA1 746 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TRMOQ9BU70 441 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SDCBP2Q9H190 292 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 DPAGT1Q9H3H5 408 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 NIT2Q9NQR4 276 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TAS2R7Q9NYW3 318 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ASF1AQ9Y294 204 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 KDM3BQ7LBC6 1761 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 FAM220BPB1ANY3 271 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TOR1AO14656 332 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF254O75437 659 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PRNPP04156 253 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 IDUAP35475 653 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ATXN1P54253 815 aaKnown RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ERVK-25P63136 954 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 MXD1Q05195 221 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 FAM214AQ32MH5 1076 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 STEAP3Q658P3 488 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TCEAL6Q6IPX3 200 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF621Q6ZSS3 439 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 BEND4Q6ZU67 534 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 RAB11FIP2Q7L804 512 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 LYSMD2Q8IV50 215 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF567Q8N184 647 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SPATA6LQ8N4H0 392 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 YIPF7Q8N8F6 280 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SPPL2AQ8TCT8 520 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZFPM2Q8WW38 1151 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 HMCESQ96FZ2 354 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 COQ10AQ96MF6 247 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PCYT2Q99447 389 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 IER2Q9BTL4 223 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ERVK-6Q9BXR3 956 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PTTG3PQ9NZH4 202 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ERVK-18Q9QC07 812 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 FZD10Q9ULW2 581 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ENTPD4Q9Y227 616 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 POFUT2Q9Y2G5 429 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 YIPF1Q9Y548 306 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms