RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF276Q8N554 614 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 AADATQ8N5Z0 425 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 ANKRD53Q8N9V6 530 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 TMEM116Q8NCL8 245 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 OR7D4Q8NG98 312 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 LILRB4Q8NHJ6 448 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 RFWD2Q8NHY2 731 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 WFDC5Q8TCV5 224 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF480Q8WV37 535 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SNX33Q8WV41 574 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SLC13A3Q8WWT9 602 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SLC5A11Q8WWX8 675 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 CD101Q93033 1021 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 UTP4Q969X6 686 aaKnown RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 KLHL29Q96CT2 875 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 ZDHHC12Q96GR4 267 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 CFAP57Q96MR6 1250 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 PRICKLE1Q96MT3 831 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SERPINB11Q96P15 392 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 RPRD1AQ96P16 312 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 MCEEQ96PE7 176 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 CIB1Q99828 191 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 P2RY13Q9BPV8 354 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 PSD2Q9BQI7 771 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 MGME1Q9BQP7 344 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 ERP44Q9BS26 406 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SOX7Q9BT81 388 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 CCDC106Q9BWC9 280 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 BBS2Q9BXC9 721 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 NUF2Q9BZD4 464 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SHCBP1LQ9BZQ2 653 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SEMA6CQ9H3T2 930 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SERHL2Q9H4I8 314 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 C8orf33Q9H7E9 229 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 LMAN1LQ9HAT1 526 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 BCO1Q9HAY6 547 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 BARX1Q9HBU1 254 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 PPANQ9NQ55 473 aaKnown RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 PIGVQ9NUD9 493 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 LIN7CQ9NUP9 197 aaKnown RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 TMEM140Q9NV12 185 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 DNAJC17Q9NVM6 304 aaKnown RBP4.45□□□□□ -1.7
SF3B1-202ENST00000409915 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.45□□□□□ -1.78e-19■□□□□ 8
SF3B1-202ENST00000409915 HCN3Q9P1Z3 774 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 LRIT1Q9P2V4 623 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 UVRAGQ9P2Y5 699 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 XPR1Q9UBH6 696 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 RNF14Q9UBS8 474 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 FBLN5Q9UBX5 448 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 TRIM10Q9UDY6 481 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 FAM153AQ9UHL3 310 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 OSGIN1Q9UJX0 560 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 PADI1Q9ULC6 663 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 CLEC4EQ9ULY5 219 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SIT1Q9Y3P8 196 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 NEU2Q9Y3R4 380 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 SNX10Q9Y5X0 201 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 ACTL7AQ9Y615 435 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 CLCA3PQ9Y6N3 262 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 MYO15AQ9UKN7 3530 aa4.45□□□□□ -1.7
SF3B1-202ENST00000409915 MYOFQ9NZM1 2061 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 A0A087X0T9 212 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SMIM30A4D0T7 59 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 OR2A25A4D2G3 310 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 AQP7P3A6NL99 342 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 C16orf96A6NNT2 1141 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 A8MZ25 164 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 LDLRAD4O15165 306 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 PFDN6O15212 129 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 DHHO43323 396 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ACSL4O60488 711 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SNX3O60493 162 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 LEFTY1O75610 366 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 KAT7O95251 611 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CER1O95813 267 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 NTRK1P04629 796 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CALB1P05937 261 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SBK3P0C264 359 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 H2AFB1P0C5Y9 115 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 H2AFB2P0C5Z0 115 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FAM228BP0C875 321 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 COX7A2P14406 83 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FAHP16930 419 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 GABRB1P18505 474 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CFL1P23528 166 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 APEX1P27695 318 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 HOXD9P28356 352 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CD6P30203 668 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MC5RP33032 325 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MATKP42679 507 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MAGEA4P43358 317 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CBX5P45973 191 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 GSSP48637 474 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 PXNP49023 591 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CLCN5P51795 746 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 GBX2P52951 348 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MFAP4P55083 255 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 RPS24P62847 133 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 XIAPP98170 497 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms