RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CSNK1A1LQ8N752 337 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 PRAP1Q96NZ9 151 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 ERP44Q9BS26 406 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 ATG10Q9H0Y0 220 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 DPH5Q9H2P9 285 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 SOX17Q9H6I2 414 aaPredicted RBP16.88■□□□□ 0.29
LSM5-204ENST00000409909 ZNF304Q9HCX3 659 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
LSM5-204ENST00000409909 SH2B3Q9UQQ2 575 aa16.88■□□□□ 0.29
LSM5-204ENST00000409909 RUVBL1Q9Y265 456 aaKnown RBP16.88■□□□□ 0.29
LSM5-204ENST00000409909 FAM187AA6NFU0 413 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 PEX12O00623 359 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 P2RX6O15547 441 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 MMP11P24347 488 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 CASQ1P31415 396 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 SNRPNP63162 240 aaKnown RBP16.87■□□□□ 0.29
LSM5-204ENST00000409909 FOXK1P85037 733 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 C2orf54Q08AI8 447 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
LSM5-204ENST00000409909 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 NADK2Q4G0N4 442 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 FAM45BPQ6NSW5 357 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 PRMT9Q6P2P2 845 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 AGTRAPQ6RW13 159 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 TMEM207Q6UWW9 146 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 SYT10Q6XYQ8 523 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 ADCK2Q7Z695 626 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 PALM2Q8IXS6 379 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 ZBED8Q8IZ13 594 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 FAM45AQ8TCE6 357 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 COL26A1Q96A83 441 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 CABS1Q96KC9 395 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 FER1L6-AS2Q96M78 137 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 MESP1Q9BRJ9 268 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 CCDC177Q9NQR7 707 aaPredicted RBP16.87■□□□□ 0.29
LSM5-204ENST00000409909 UTP6Q9NYH9 597 aaKnown RBP16.87■□□□□ 0.29
LSM5-204ENST00000409909 GPR83Q9NYM4 423 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 ZFATQ9P243 1243 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 IKZF3Q9UKT9 509 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 HS3ST3B1Q9Y662 390 aa16.87■□□□□ 0.29
LSM5-204ENST00000409909 AGPSO00116 658 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 SOCS6O14544 535 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 PIAS1O75925 651 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 MLLT10P55197 1068 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 NAE1Q13564 534 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 PRAMEF13Q5VWM6 474 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 MAATS1Q7Z4T9 603 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 STRA8Q7Z7C7 330 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 ZC3HC1Q86WB0 502 aaKnown RBP16.86■□□□□ 0.29
LSM5-204ENST00000409909 GALNT16Q8N428 558 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 CLEC1AQ8NC01 280 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 BBOF1Q8ND07 529 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 RERGQ96A58 199 aaPredicted RBP16.86■□□□□ 0.29
LSM5-204ENST00000409909 NACC2Q96BF6 587 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 SMAD5Q99717 465 aaKnown RBP16.86■□□□□ 0.29
LSM5-204ENST00000409909 SGPP1Q9BX95 441 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 SMYD2Q9NRG4 433 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 TMEM184CQ9NVA4 438 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 GRHL1Q9NZI5 618 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 WHRNQ9P202 907 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 CDC23Q9UJX2 597 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 PLAAQ9Y263 795 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 ZNF451Q9Y4E5 1061 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 PCDHGB7Q9Y5F8 929 aa16.86■□□□□ 0.29
LSM5-204ENST00000409909 RP1L1Q8IWN7 2480 aaPredicted RBP16.85■□□□□ 0.29
LSM5-204ENST00000409909 NUP210LQ5VU65 1888 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 FOXS1O43638 330 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 IGHEP01854 428 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 STATHP02808 62 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 NPPBP16860 134 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 KLC1Q07866 573 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 KIRREL2Q6UWL6 708 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 CAPN12Q6ZSI9 719 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 VN1R4Q7Z5H5 301 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 LAPTM4BQ86VI4 370 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 STT3BQ8TCJ2 826 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 ALKBH8Q96BT7 664 aaKnown RBP16.85■□□□□ 0.29
LSM5-204ENST00000409909 PDLIM5Q96HC4 596 aaKnown RBP16.85■□□□□ 0.29
LSM5-204ENST00000409909 MCMBPQ9BTE3 642 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 PCBD2Q9H0N5 130 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 ZNF282Q9UDV7 671 aaPredicted RBP16.85■□□□□ 0.29
LSM5-204ENST00000409909 FBXL4Q9UKA2 621 aa16.85■□□□□ 0.29
LSM5-204ENST00000409909 NXT1Q9UKK6 140 aaKnown RBP16.85■□□□□ 0.29
LSM5-204ENST00000409909 MRPS2Q9Y399 296 aaKnown RBP16.85■□□□□ 0.29
LSM5-204ENST00000409909 HECTD1Q9ULT8 2610 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 DOCK10Q96BY6 2186 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 IGLV3-12A0A075B6K2 115 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 KCNE1BA0A087WTH5 132 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 NDC80O14777 642 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 FFAR3O14843 346 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 GPR42O15529 346 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 ALOX12BO75342 701 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 HIST1H2AGP0C0S8 130 aaPredicted RBP16.84■□□□□ 0.29
LSM5-204ENST00000409909 ZGLP1P0C6A0 271 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 HIST1H2ADP20671 130 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 SAT1P21673 171 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 FBLP22087 321 aaKnown RBP16.84■□□□□ 0.29
LSM5-204ENST00000409909 HRH2P25021 359 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms