RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 WDR34Q96EX3 536 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 NPAS2Q99743 824 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 TBC1D10AQ9BXI6 508 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 EBPLQ9BY08 206 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 EHD1Q9H4M9 534 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 SDR39U1Q9NRG7 319 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-204ENST00000409727 BAIAP2L1Q9UHR4 511 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 SPAG17Q6Q759 2223 aa11.99□□□□□ -0.49
CHMP3-204ENST00000409727 ARHGEF17Q96PE2 2063 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 SAP18O00422 153 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 BTN3A3O00478 584 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 VILLO15195 856 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 RSL1D1O76021 490 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 TGFB1P01137 390 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 KRT16P08779 473 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 NQO1P15559 274 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 MNAT1P51948 309 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 MAZP56270 477 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 PRDX1Q06830 199 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 PTGR1Q14914 329 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 ELOCQ15369 112 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 DEFB133Q30KQ1 61 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 MMEL1Q495T6 779 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 CYP20A1Q6UW02 462 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 TMIGD1Q6UXZ0 262 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 ZFAND4Q86XD8 727 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 FUNDC1Q8IVP5 155 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 GPR156Q8NFN8 814 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 NUDT8Q8WV74 236 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 APOLD1Q96LR9 279 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 MRPL1Q9BYD6 325 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 MRPS30Q9NP92 439 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 TMEM74BQ9NUR3 256 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 UCKL1Q9NWZ5 548 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 VPS29Q9UBQ0 182 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 EIF3LQ9Y262 564 aaKnown RBP11.98□□□□□ -0.49
CHMP3-204ENST00000409727 PCM1Q15154 2024 aa11.98□□□□□ -0.49
CHMP3-204ENST00000409727 IGKV1-8A0A0C4DH67 115 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 KIR2DS5A0A0G2JLQ3 304 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 A0A0G2JNG1 304 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 GSAPA4D1B5 854 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 OR6C74A6NCV1 312 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 KIR2DS3K7RE56 304 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 YY2O15391 372 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SLC22A3O75751 556 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SNRPB2P08579 225 aaKnown RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 XRCC1P18887 633 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 POLR2CP19387 275 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 HHEXQ03014 270 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 CSTF3Q12996 717 aaKnown RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 LAPTM5Q13571 262 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 E2F2Q14209 437 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 KIR2DS5Q14953 304 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 VPS26BQ4G0F5 336 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 CACHD1Q5VU97 1274 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 GKN2Q86XP6 184 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 FAM129CQ86XR2 697 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 ADGRF3Q8IZF5 1079 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 KRT78Q8N1N4 520 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 FBXL6Q8N531 539 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 ZNF548Q8NEK5 533 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 OR2L3Q8NG85 312 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 GAB3Q8WWW8 586 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 MCUR1Q96AQ8 359 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 AIF1LQ9BQI0 150 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 CADM1Q9BY67 442 aaKnown RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 BRINP2Q9C0B6 783 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 POT1Q9NUX5 634 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 MRGBPQ9NV56 204 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 OR6C2Q9NZP2 312 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SPASTQ9UBP0 616 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 GSC2O15499 205 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 AQP9O43315 295 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 HRO43593 1189 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 OR1F1O43749 312 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 GPR37L1O60883 481 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 STATHP02808 62 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 UBE2IP63279 158 aaKnown RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 MAD2L1Q13257 205 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 HERC3Q15034 1050 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 KIAA0040Q15053 153 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 MAPRE2Q15555 327 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 TEAD4Q15561 434 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 PDCD4Q53EL6 469 aaKnown RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 KIAA1614Q5VZ46 1190 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 PMS2CLQ68D20 193 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SLC9B2Q86UD5 537 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 LAS2Q8IYD9 372 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 DTWD2Q8NBA8 298 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 ABHD11Q8NFV4 315 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 CDC26Q8NHZ8 85 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 UBE2E3Q969T4 207 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 UTP4Q969X6 686 aaKnown RBP11.97□□□□□ -0.49
CHMP3-204ENST00000409727 VPS33AQ96AX1 596 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 CMTM7Q96FZ5 175 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 RTKNQ9BST9 563 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms