RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZNF574Q6ZN55 896 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 TMPRSS9Q7Z410 1059 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 SLITRK4Q8IW52 837 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 HOMEZQ8IX15 550 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 FLVCR1-AS1Q8TAF5 88 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 SLC5A11Q8WWX8 675 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 MAGEB10Q96LZ2 347 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 TGM7Q96PF1 710 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 PITPNM3Q9BZ71 974 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 GSTO2Q9H4Y5 243 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 EML4Q9HC35 981 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 FAM53CQ9NYF3 392 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 ANKMY1Q9P2S6 941 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 SNX7Q9UNH6 387 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 SATB2Q9UPW6 733 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 PCDHGA8Q9Y5G5 932 aa15.89■□□□□ 0.13
TSPAN4-208ENST00000409531 URB1O60287 2271 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 A0A1W2PNU3 283 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 KLF11O14901 512 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 TOX3O15405 576 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 MAP3K7O43318 606 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 BRINP1O60477 761 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 UGDHO60701 494 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 DXOO77932 396 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 BGNP21810 368 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 ARL1P40616 181 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 GALNT1Q10472 559 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 STX3Q13277 289 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 RCN2Q14257 317 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 IGF2-ASQ6U949 168 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 ZCCHC23Q6ZST2 131 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 RAB11FIP2Q7L804 512 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 OR4D9Q8NGE8 314 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 OR6Y1Q8NGX8 325 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 LRRC8CQ8TDW0 803 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 NEIL2Q969S2 332 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 ZUFSPQ96AP4 578 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 SLC46A1Q96NT5 459 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 NSUN5Q96P11 429 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 NUDT22Q9BRQ3 303 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 NTMT1Q9BV86 223 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 DRC3Q9H069 523 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 SEMA6CQ9H3T2 930 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 EHD1Q9H4M9 534 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 NOL11Q9H8H0 719 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 MANSC1Q9H8J5 431 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 PELI2Q9HAT8 420 aa15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 SEMA4BQ9NPR2 832 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 MDC1Q14676 2089 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-208ENST00000409531 DMXL2Q8TDJ6 3036 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 COL27A1Q8IZC6 1860 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 SRRM3A6NNA2 597 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 RASSF9O75901 435 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 EBLN1P0CF75 366 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CDH1P12830 882 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CXCR2P25025 360 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 RBMS1P29558 406 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CSF2RBP32927 897 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 GRK3P35626 688 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CCR8P51685 355 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CDH13P55290 713 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 PKNOX1P55347 436 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 GFERP55789 205 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 IRF8Q02556 426 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CFHR1Q03591 330 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 LAPTM5Q13571 262 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 TBCCQ15814 346 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 PHF19Q5T6S3 580 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 LIPJQ5W064 366 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 ATG9BQ674R7 924 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 FAM92BQ6ZTR7 304 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 PRSS42Q7Z5A4 293 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 TMPRSS11BQ86T26 416 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 KIRREL3Q8IZU9 778 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 TBC1D19Q8N5T2 526 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 ABHD11Q8NFV4 315 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 TRPC4APQ8TEL6 797 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CKAP2Q8WWK9 683 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 FGF11Q92914 225 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 PTCD3Q96EY7 689 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 PRR11Q96HE9 360 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 MAGEB18Q96M61 343 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 ZNF578Q96N58 590 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 ZNF382Q96SR6 550 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 CMKLR1Q99788 373 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 DPH7Q9BTV6 452 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 EFCAB11Q9BUY7 163 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 PITHD1Q9GZP4 211 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 ACTR8Q9H981 624 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 ZBTB26Q9HCK0 441 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 TMEM184CQ9NVA4 438 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 KLK4Q9Y5K2 254 aa15.87■□□□□ 0.13
TSPAN4-208ENST00000409531 IGHV5-10-1A0A0J9YXX1 117 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 E7EQ34 232 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 OR7A17O14581 309 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 PLD2O14939 933 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 ZBTB11O95625 1053 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 C1GALT1C1LP0DN25 315 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 HNF4AP41235 474 aa15.86■□□□□ 0.13
TSPAN4-208ENST00000409531 GRIA3P42263 894 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms