RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PRAMEF14Q5SWL7 426 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 LRIF1Q5T3J3 769 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 PRAMEF13Q5VWM6 474 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 NXPE4Q6UWF7 544 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 GCNT7Q6ZNI0 430 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 ZBTB49Q6ZSB9 765 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 MSANTD1Q6ZTZ1 278 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 OR7A2PQ8NGA2 310 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 SETD7Q8WTS6 366 aaKnown RBP19.98■□□□□ 0.79
USP39-203ENST00000409470 SEPHS2Q99611 448 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 GABRG3Q99928 467 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 TBCDQ9BTW9 1192 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 EHD1Q9H4M9 534 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 AGPAT4Q9NRZ5 378 aa19.98■□□□□ 0.79
USP39-203ENST00000409470 TRBV5-3A0A0A0MS03 114 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 PIPSLA2A3N6 862 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 FAM149AA5PLN7 773 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 GPR89AB7ZAQ6 455 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 RFXANKO14593 260 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 KLF8O95600 359 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 B3GALT4O96024 378 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 EGFP01133 1207 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 SLC35G4P0C7Q5 338 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 GPR89BP0CG08 455 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 HOXB2P14652 356 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 RPL10P27635 214 aaKnown RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 TEAD1P28347 426 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 PRKCQQ04759 706 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 MAP7Q14244 749 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 C6orf52Q5T4I8 152 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 KIAA1161Q6NSJ0 714 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 CHST15Q7LFX5 561 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 PHACTR4Q8IZ21 702 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 IL17RCQ8NAC3 791 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 FIG4Q92562 907 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 NELL1Q92832 810 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 C1QTNF2Q9BXJ5 285 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 REXO4Q9GZR2 422 aaKnown RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 DOCK9Q9BZ29 2069 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 SAC3D1A6NKF1 404 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 PLRG1O43660 514 aaKnown RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 RNGTTO60942 597 aaKnown RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 ANXA4P09525 319 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 CKMT2P17540 419 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 POLE2P56282 527 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 MEF2AQ02078 507 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 LAPTM5Q13571 262 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 PON2Q15165 354 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 UGT8Q16880 541 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 C10orf62Q5T681 223 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 TBC1D21Q8IYX1 336 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 OR5K2Q8NHB8 316 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 CHTF18Q8WVB6 975 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 STARD8Q92502 1023 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 C11orf24Q96F05 449 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 AURKBQ96GD4 344 aaPredicted RBP19.97■□□□□ 0.79
USP39-203ENST00000409470 CCDC115Q96NT0 180 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 HHIPQ96QV1 700 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 SLC17A9Q9BYT1 436 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 LMCD1Q9NZU5 365 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 UNC80Q8N2C7 3258 aa19.97■□□□□ 0.79
USP39-203ENST00000409470 A6NHS1 94 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 H0YJX3 145 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 ADAM23O75077 832 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 MYCLP1P12525 358 aaPredicted RBP19.96■□□□□ 0.79
USP39-203ENST00000409470 ACP5P13686 325 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 LTBRP36941 435 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 CDKN2CP42773 168 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 ASMTP46597 345 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 CLCNKAP51800 687 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 RAE1P78406 368 aaKnown RBP19.96■□□□□ 0.79
USP39-203ENST00000409470 MTAPQ13126 283 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 LAS2Q8IYD9 372 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 MARVELD2Q8N4S9 558 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 ZNF548Q8NEK5 533 aaPredicted RBP19.96■□□□□ 0.79
USP39-203ENST00000409470 CENPNQ96H22 339 aaPredicted RBP19.96■□□□□ 0.79
USP39-203ENST00000409470 SLC29A1Q99808 456 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 CPPED1Q9BRF8 314 aaPredicted RBP19.96■□□□□ 0.79
USP39-203ENST00000409470 HAUS8Q9BT25 410 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 C1QTNF7Q9BXJ2 289 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 OSGEPL1Q9H4B0 414 aa19.96■□□□□ 0.79
USP39-203ENST00000409470 KAT8Q9H7Z6 458 aaKnown RBP19.96■□□□□ 0.79
USP39-203ENST00000409470 TBC1D3DA0A087WVF3 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3IA0A087WXS9 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3EA0A087X179 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3KA0A087X1G2 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 GNG14A0A1W2PPG7 69 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ELOVL7A1L3X0 281 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 KLHL33A6NCF5 533 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3FA6NER0 549 aaPredicted RBP19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3LB9A6J9 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ANHXE9PGG2 379 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 FOXE1O00358 373 aaPredicted RBP19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3HP0C7X1 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 COL9A1P20849 921 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 MAT2AP31153 395 aaKnown RBP19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3GQ6DHY5 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3CQ6IPX1 549 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 LCTLQ6UWM7 567 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TBC1D3Q8IZP1 549 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms