RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TAF5Q15542 800 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 MPEG1Q2M385 716 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 ESCO2Q56NI9 601 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 ATAD3CQ5T2N8 411 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 UBE2UQ5VVX9 321 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 TAPT1Q6NXT6 567 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 METTL2BQ6P1Q9 378 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 TAF2Q6P1X5 1199 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 CATSPERGQ6ZRH7 1159 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SLC47A2Q86VL8 602 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 DHFR2Q86XF0 187 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 PLCZ1Q86YW0 608 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 MAPKAPK5Q8IW41 473 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 YAF2Q8IY57 180 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 THNSL1Q8IYQ7 743 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 PM20D2Q8IYS1 436 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 LGI2Q8N0V4 545 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 RHOXF1Q8NHV9 184 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 LHFPL5Q8TAF8 219 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SETD6Q8TBK2 473 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 RDH11Q8TC12 318 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 LRRC20Q8TCA0 184 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 BRSK1Q8TDC3 778 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 DEPDC1BQ8WUY9 529 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SNX19Q92543 992 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 FIG4Q92562 907 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 PIK3R3Q92569 461 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 HDAC2Q92769 488 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 MUL1Q969V5 352 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 ZNF566Q969W8 418 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 REXO5Q96IC2 774 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 ZNF778Q96MU6 729 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 TRIB1Q96RU8 372 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 TMEM47Q9BQJ4 181 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 TRAF4Q9BUZ4 470 aaPredicted RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 NAA50Q9GZZ1 169 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 ILKAPQ9H0C8 392 aaPredicted RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 SEMA6AQ9H2E6 1030 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 NOL11Q9H8H0 719 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 COG4Q9H9E3 785 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 ZBTB26Q9HCK0 441 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 TUFT1Q9NNX1 390 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 INTS10Q9NVR2 710 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.32□□□□□ -1.56
CLK1-202ENST00000409403 DNMT3BQ9UBC3 853 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 EIF2B4Q9UI10 523 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 ADAM28Q9UKQ2 775 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SARDHQ9UL12 918 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 BAG5Q9UL15 447 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 TBX21Q9UL17 535 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SNX7Q9UNH6 387 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 IGSF10Q6WRI0 2623 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 DSPP15924 2871 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 TICRRQ7Z2Z1 1910 aa5.32□□□□□ -1.56
CLK1-202ENST00000409403 SMG1Q96Q15 3661 aaKnown RBP5.32□□□□□ -1.56
CLK1-202ENST00000409403 LOXHD1Q8IVV2 1947 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CYP2D7A0A087X1C5 515 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 A0A0G2JLL6 359 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 FAM159BA6NKW6 160 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TRPC5OSA6NMA1 111 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SOCS2O14508 198 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZNF195O14628 629 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 STX7O15400 261 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZBTB14O43829 449 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MRPS14O60783 128 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 BCAS1O75363 584 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 EPN2O95208 641 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SNX4O95219 450 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CALB1P05937 261 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PGK2P07205 417 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 KRT19P08727 400 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 RPL22P35268 128 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 GJC1P36383 396 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SERPINB5P36952 375 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TALDO1P37837 337 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 GRIA3P42263 894 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 RPS9P46781 194 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 RPS5P46782 204 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 SCNN1GP51170 649 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 NKX2-5P52952 324 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 RPS8P62241 208 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 RPL10AP62906 217 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 GALK2Q01415 458 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CNTN2Q02246 1040 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 GAD2Q05329 585 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 NFE2L1Q14494 772 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MAPK11Q15759 364 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 UBE2SQ16763 222 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 HADHQ16836 314 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 INO80DQ53TQ3 878 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 PRR16Q569H4 304 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 YIF1BQ5BJH7 314 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 BRMS1LQ5PSV4 323 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 N4BP2L1Q5TBK1 243 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 C12orf60Q5U649 245 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ANKRD22Q5VYY1 191 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TTC23Q5W5X9 447 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms