RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 IRF8Q02556 426 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 CFHR1Q03591 330 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 STX3Q13277 289 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 EIF3IQ13347 325 aaKnown RBP12.52□□□□□ -0.41
LIMS2-203ENST00000409254 ZC3H12BQ5HYM0 836 aaKnown RBP12.52□□□□□ -0.41
LIMS2-203ENST00000409254 MANEAQ5SRI9 462 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 IRGCQ6NXR0 463 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 GPRIN3Q6ZVF9 776 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 ARHGAP22Q7Z5H3 698 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 TMPRSS11BQ86T26 416 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-203ENST00000409254 PAQR7Q86WK9 346 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 AFAP1L2Q8N4X5 818 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 CCNYL1Q8N7R7 359 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 OR8K5Q8NH50 307 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 MGARPQ8TDB4 240 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 AGAP11Q8TF27 550 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 LIN37Q96GY3 246 aaPredicted RBP12.52□□□□□ -0.41
LIMS2-203ENST00000409254 FAR2Q96K12 515 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 TRAPPC9Q96Q05 1148 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 DEPDC7Q96QD5 511 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 PAIP2Q9BPZ3 127 aaKnown RBP12.52□□□□□ -0.41
LIMS2-203ENST00000409254 NUDT22Q9BRQ3 303 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 DPH7Q9BTV6 452 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 MANSC1Q9H8J5 431 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 ACTR8Q9H981 624 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 SLC6A20Q9NP91 592 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 PFDN4Q9NQP4 134 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 CIDEBQ9UHD4 219 aa12.52□□□□□ -0.41
LIMS2-203ENST00000409254 CACNA1AO00555 2505 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 SRRM3A6NNA2 597 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 E7EQ34 232 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 SLCO1B7G3V0H7 640 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 TXNDC9O14530 226 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 OR7A17O14581 309 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 CDH1P12830 882 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 HSD3B1P14060 373 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 NELFEP18615 380 aaKnown RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 MAGP20916 626 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 HSD3B2P26439 372 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 ARFIP1P53367 373 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 EMP3P54852 163 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 GFERP55789 205 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 CSNK1G2P78368 415 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 PHEXP78562 749 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 OCRLQ01968 901 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 CHIT1Q13231 466 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 HIST2H2ACQ16777 129 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 AMZ1Q400G9 498 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 TMTC4Q5T4D3 741 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 KIAA1614Q5VZ46 1190 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 HIST2H2AA3Q6FI13 130 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 FIGLAQ6QHK4 219 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 LAS2Q8IYD9 372 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 D2HGDHQ8N465 521 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 DEFB124Q8NES8 71 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 MDM1Q8TC05 714 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 ATP6V1E2Q96A05 226 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 NSUN5Q96P11 429 aaKnown RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 TGM7Q96PF1 710 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 MAP3K3Q99759 626 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 ZFYVE21Q9BQ24 234 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 ACAT2Q9BWD1 397 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 B3GNT4Q9C0J1 378 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 STRADBQ9C0K7 418 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 RHBGQ9H310 441 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 NOL11Q9H8H0 719 aaKnown RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 PDE7BQ9NP56 450 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 DLL3Q9NYJ7 618 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 AKAP7Q9P0M2 348 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-203ENST00000409254 SNX6Q9UNH7 406 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 RAP2CQ9Y3L5 183 aa12.51□□□□□ -0.41
LIMS2-203ENST00000409254 AHCTF1Q8WYP5 2266 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 IGHV5-10-1A0A0J9YXX1 117 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 LRRC14BA6NHZ5 514 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 SRPX2O60687 465 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 KRT6AP02538 564 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 KRT6BP04259 564 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 FTH1P19P0C7X4 201 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 UROSP10746 265 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 MYF5P13349 255 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 HGFP14210 728 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 BGNP21810 368 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 MLLT3P42568 568 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 SLC1A6P48664 564 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 KRT6CP48668 564 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 INSM1Q01101 510 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 ACY1Q03154 408 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 BST1Q10588 318 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 TSTA3Q13630 321 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 DOC2AQ14183 400 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 RBBP7Q16576 425 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 C18orf21Q32NC0 220 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms