RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 KCTD11Q693B1 232 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 LRRC8BQ6P9F7 803 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 CEP128Q6ZU80 1094 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 CPEB2Q7Z5Q1 589 aaKnown RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 FGD2Q7Z6J4 655 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 LUZP1Q86V48 1076 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 CRLF3Q8IUI8 442 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 KLHDC8BQ8IXV7 354 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 TAB3Q8N5C8 712 aaPredicted RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 FAM98AQ8NCA5 519 aaKnown RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 SKA2Q8WVK7 121 aaPredicted RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 KRT35Q92764 455 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 GBP4Q96PP9 640 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 CHP1Q99653 195 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 ZNF559Q9BR84 538 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 CARD6Q9BX69 1037 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 VN1R1Q9GZP7 353 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 GSX1Q9H4S2 264 aaPredicted RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 LRRC40Q9H9A6 602 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 NPDC1Q9NQX5 325 aaPredicted RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 IFNKQ9P0W0 207 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 TTC7AQ9ULT0 858 aaPredicted RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 RUVBL2Q9Y230 463 aaKnown RBP15.77■□□□□ 0.12
CHMP3-203ENST00000409225 ASB1Q9Y576 335 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 NFS1Q9Y697 457 aa15.77■□□□□ 0.12
CHMP3-203ENST00000409225 FAM221AA4D161 298 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 NKX2-6A6NCS4 301 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 FAM90A27PA6NNH2 459 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 FOXO6A8MYZ6 492 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 FOXS1O43638 330 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 MAN1A2O60476 641 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 VPS26AO75436 327 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 C1orf105O95561 183 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 MBD3O95983 291 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 GOT2P00505 430 aaKnown RBP15.76■□□□□ 0.11
CHMP3-203ENST00000409225 KLK2P20151 261 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 PSMA3P25788 255 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 AOAHP28039 575 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 CMPK1P30085 196 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 PPP2R2AP63151 447 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 OC90Q02509 493 aaPredicted RBP15.76■□□□□ 0.11
CHMP3-203ENST00000409225 MEP1AQ16819 746 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 PLAG1Q6DJT9 500 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 H3F3CQ6NXT2 135 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 CHDHQ8NE62 594 aaPredicted RBP15.76■□□□□ 0.11
CHMP3-203ENST00000409225 OR8K1Q8NGG5 319 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 GSDMBQ8TAX9 411 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 HDAC10Q969S8 669 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 CCDC42Q96M95 316 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 NPAS2Q99743 824 aa15.76■□□□□ 0.11
CHMP3-203ENST00000409225 NHEJ1Q9H9Q4 299 aaPredicted RBP15.76■□□□□ 0.11
CHMP3-203ENST00000409225 SCN2AQ99250 2005 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 GABRR3A8MPY1 467 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 FAM155BO75949 473 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 ZNF24P17028 368 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 NAA25Q14CX7 972 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 TCEAL1Q15170 157 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 MINDY4Q4G0A6 757 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 RNFT1Q5M7Z0 435 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 GARNL3Q5VVW2 1013 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 AFTPHQ6ULP2 937 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 OR13J1Q8NGT2 312 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 HMGCLL1Q8TB92 370 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 CYTH2Q99418 400 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 FOXC2Q99958 501 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 PLCD4Q9BRC7 762 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 UCK2Q9BZX2 261 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 DRC3Q9H069 523 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 MRPS30Q9NP92 439 aaKnown RBP15.75■□□□□ 0.11
CHMP3-203ENST00000409225 C19orf25Q9UFG5 118 aaPredicted RBP15.75■□□□□ 0.11
CHMP3-203ENST00000409225 SLC2A6Q9UGQ3 507 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
CHMP3-203ENST00000409225 ACANP16112 2415 aa15.75■□□□□ 0.11
CHMP3-203ENST00000409225 GOLGA6L22H0YM25 854 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 PJA2O43164 708 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 METTL18O95568 372 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 TPOP07202 933 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 SP1P08047 785 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 PTGER1P34995 402 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 SEMA3AQ14563 771 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 MAPKAPK3Q16644 382 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 PARP6Q2NL67 630 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 CES4AQ5XG92 561 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 SLC25A25Q6KCM7 469 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 CD163Q86VB7 1156 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 PAQR7Q86WK9 346 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 DMRTC2Q8IXT2 367 aaPredicted RBP15.74■□□□□ 0.11
CHMP3-203ENST00000409225 SHISA5Q8N114 240 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 MARVELD2Q8N4S9 558 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 CPSF7Q8N684 471 aaKnown RBP15.74■□□□□ 0.11
CHMP3-203ENST00000409225 ASB5Q8WWX0 329 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 CXXC4Q9H2H0 198 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 CCM2LQ9NUG4 571 aaPredicted RBP15.74■□□□□ 0.11
CHMP3-203ENST00000409225 TSR3Q9UJK0 312 aaKnown RBP15.74■□□□□ 0.11
CHMP3-203ENST00000409225 R3HDM2Q9Y2K5 976 aaKnown RBP15.74■□□□□ 0.11
CHMP3-203ENST00000409225 INTS1Q8N201 2190 aaKnown RBP15.74■□□□□ 0.11
CHMP3-203ENST00000409225 FBN3Q75N90 2809 aa15.74■□□□□ 0.11
CHMP3-203ENST00000409225 OR2W5A6NFC9 320 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms