RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 UTP23Q9BRU9 249 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 REPIN1Q9BWE0 567 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 SYNPO2LQ9H987 977 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 KCNJ16Q9NPI9 418 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 NLE1Q9NVX2 485 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 ZNF358Q9NW07 568 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 DNAJB12Q9NXW2 375 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 CDC14AQ9UNH5 594 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 HRH3Q9Y5N1 445 aa12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-203ENST00000409219 KRT87PA6NCN2 255 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 NEURL1O76050 574 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 RPN2P04844 631 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 TNNT1P13805 278 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 ODF2Q5BJF6 829 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 ITPRIPL1Q6GPH6 555 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 BIVMQ86UB2 503 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 RPRMLQ8N4K4 120 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 CPSF7Q8N684 471 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 OR2L3Q8NG85 312 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 CFAP61Q8NHU2 1237 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 MMABQ96EY8 250 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 ALPK1Q96QP1 1244 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 PANX2Q96RD6 677 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 ZFYVE21Q9BQ24 234 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 C10orf88Q9H8K7 445 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 DDX56Q9NY93 547 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 GNPTGQ9UJJ9 305 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC39A10Q9ULF5 831 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 RUVBL1Q9Y265 456 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 HEATR5BQ9P2D3 2071 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 OR2A25A4D2G3 310 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 OR51F1A6NGY5 319 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 USP27XA6NNY8 438 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 GABRR3A8MPY1 467 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 CTAG2O75638 210 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 TPOP07202 933 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 OR56A5P0C7T3 313 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 RBL1P28749 1068 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 CCR7P32248 378 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 EMP3P54852 163 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 YBX1P67809 324 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 MAT1AQ00266 395 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 TRIM14Q14142 442 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 MEP1AQ16819 746 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 HKDC1Q2TB90 917 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 UNC5DQ6UXZ4 953 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 PRIMA1Q86XR5 153 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 OR2A1Q8NGT9 310 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC35G2Q8TBE7 412 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 CDKN2AIPNLQ96HQ2 116 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 C16orf45Q96MC5 204 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 TBL1YQ9BQ87 522 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 RAB11FIP5Q9BXF6 653 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 VN1R1Q9GZP7 353 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 ARNT2Q9HBZ2 717 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 PLEKHA6Q9Y2H5 1048 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 AAR2Q9Y312 384 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 HYOU1Q9Y4L1 999 aa12.14□□□□□ -0.47
CHRNA1-203ENST00000409219 DNAJC13O75165 2243 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 RTTNQ86VV8 2226 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 FAM237BA0A1B0GVD1 139 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 A0A1W2PPV9 198 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 KIAA1324LA8MWY0 1029 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 HACD1B0YJ81 288 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 H0YGG7 62 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 DYNC1I1O14576 645 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 PROM1O43490 865 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 FOXS1O43638 330 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 OR1I1O60431 355 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 SP1P08047 785 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 FOXN2P32314 431 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 PTGS2P35354 604 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 HSPA14Q0VDF9 509 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 SPARCL1Q14515 664 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC25A25Q6KCM7 469 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 CPEB2Q7Z5Q1 589 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 CCDC71Q8IV32 467 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 SEC16BQ96JE7 1060 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 BAG1Q99933 345 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 POLDIP3Q9BY77 421 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 LRFN1Q9P244 771 aa12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHRNA1-203ENST00000409219 hCG_1818297A0A087WSY0 165 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 A0A0A6YYC8 382 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 A0A1B0GTH9 108 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 I3L1I5 382 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 KLK8O60259 260 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 NME2P1O60361 137 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 GPC4O75487 556 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms