RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 KCNK6Q9Y257 313 aa18.29■□□□□ 0.52
USP39-202ENST00000409025 MBTPS2O43462 519 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 ERN1O75460 977 aaKnown RBP18.28■□□□□ 0.52
USP39-202ENST00000409025 NDUFV2P19404 249 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 PHEXP78562 749 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 SELPLGQ14242 412 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 MSANTD1Q6ZTZ1 278 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 GPR180Q86V85 440 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 PROSER1Q86XN7 944 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 C1orf52Q8N6N3 182 aaKnown RBP18.28■□□□□ 0.52
USP39-202ENST00000409025 CHTF18Q8WVB6 975 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 FAM3CQ92520 227 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 GFM2Q969S9 779 aaKnown RBP18.28■□□□□ 0.52
USP39-202ENST00000409025 C11orf24Q96F05 449 aaPredicted RBP18.28■□□□□ 0.52
USP39-202ENST00000409025 MSANTD3Q96H12 275 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 INSM2Q96T92 566 aaPredicted RBP18.28■□□□□ 0.52
USP39-202ENST00000409025 MMP17Q9ULZ9 603 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 MAN2B2Q9Y2E5 1009 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 WDR37Q9Y2I8 494 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 AP3M1Q9Y2T2 418 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 DTNAQ9Y4J8 743 aa18.28■□□□□ 0.52
USP39-202ENST00000409025 TCRBV21S2A2A0A5A6 115 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 SH3BGRLO75368 114 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 ASGR2P07307 311 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 HOXC4P09017 264 aaPredicted RBP18.27■□□□□ 0.52
USP39-202ENST00000409025 CDH1P12830 882 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 IDSP22304 550 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 PHC1P78364 1004 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 SFT2D3Q587I9 215 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 DUS1LQ6P1R4 473 aaKnown RBP18.27■□□□□ 0.52
USP39-202ENST00000409025 C17orf64Q86WR6 236 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 KRT78Q8N1N4 520 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 DENND6BQ8NEG7 585 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 ADCY4Q8NFM4 1077 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 SMPDL3AQ92484 453 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 STARD8Q92502 1023 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 SH3KBP1Q96B97 665 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 PCBD2Q9H0N5 130 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 PIF1Q9H611 641 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 NEUROG3Q9Y4Z2 214 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 PCDHB3Q9Y5E6 796 aa18.27■□□□□ 0.52
USP39-202ENST00000409025 A0A096LPI6 279 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 DHRS12A0PJE2 317 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 LATO43561 262 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 AKAP10O43572 662 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 NARSO43776 548 aaKnown RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 PSMA4P25789 261 aaKnown RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 KIR3DL1P43629 444 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 ASMTP46597 345 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 KIAA1024LP59773 190 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 MEF2AQ02078 507 aaPredicted RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 SRSF11Q05519 484 aaKnown RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 CYP4F3Q08477 520 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 CCINQ13939 588 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 FXNQ16595 210 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 LRIT3Q3SXY7 679 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 RUNDC3AQ59EK9 446 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 DNAJC14Q6Y2X3 702 aaPredicted RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 TRIM69Q86WT6 500 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 TMEM102Q8N9M5 508 aaPredicted RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 CANT1Q8WVQ1 401 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 SCARF2Q96GP6 870 aaPredicted RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 HHIPQ96QV1 700 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 THUMPD3Q9BV44 507 aaKnown RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 DMRT3Q9NQL9 472 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 CCM2LQ9NUG4 571 aaPredicted RBP18.27■□□□□ 0.51
USP39-202ENST00000409025 ARMC1Q9NVT9 282 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 TAC3Q9UHF0 121 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 MAPRE3Q9UPY8 281 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 TSC22D4Q9Y3Q8 395 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 PLEKHM1Q9Y4G2 1056 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 BRWD1Q9NSI6 2320 aa18.27■□□□□ 0.51
USP39-202ENST00000409025 PCM1Q15154 2024 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 FPGTO14772 594 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 ANXA4P09525 319 aaPredicted RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 MTHFD1P11586 935 aaKnown RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 IL10P22301 178 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 ACSL1P33121 698 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 PIK3CBP42338 1070 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 TPMTP51580 245 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 OR4D2P58180 307 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 C21orf58P58505 322 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 RAE1P78406 368 aaKnown RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 MTAPQ13126 283 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 SF1Q15637 639 aaKnown RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 LRIF1Q5T3J3 769 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 LPCAT2Q7L5N7 544 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 TMEM132CQ8N3T6 1108 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 GPR156Q8NFN8 814 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 CDC26Q8NHZ8 85 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 GAS2L1Q99501 681 aaPredicted RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 MENTQ9BUN1 341 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 ACAT2Q9BWD1 397 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 PHF7Q9BWX1 381 aaPredicted RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 PAIP1Q9H074 479 aaKnown RBP18.26■□□□□ 0.51
USP39-202ENST00000409025 SPNS1Q9H2V7 528 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 PELI2Q9HAT8 420 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 CD93Q9NPY3 652 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 SERHLQ9NQF3 203 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 IMP3Q9NV31 184 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms