RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TRIM36Q9NQ86 728 aa13□□□□□ -0.33
SNED1-205ENST00000405547 ZCCHC3Q9NUD5 404 aaKnown RBP13□□□□□ -0.33
SNED1-205ENST00000405547 SLC2A6Q9UGQ3 507 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PRSS51A0A1B0GVH4 220 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CPNE3O75131 537 aaKnown RBP13□□□□□ -0.33
SNED1-205ENST00000405547 CHRM5P08912 532 aaPredicted RBP13□□□□□ -0.33
SNED1-205ENST00000405547 HTR1EP28566 365 aa13□□□□□ -0.33
SNED1-205ENST00000405547 DNASE1L1P49184 302 aa13□□□□□ -0.33
SNED1-205ENST00000405547 SP2Q02086 613 aa13□□□□□ -0.33
SNED1-205ENST00000405547 GRIK2Q13002 908 aa13□□□□□ -0.33
SNED1-205ENST00000405547 SLC35G1Q2M3R5 365 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PIGGQ5H8A4 983 aa13□□□□□ -0.33
SNED1-205ENST00000405547 SUSD3Q96L08 255 aa13□□□□□ -0.33
SNED1-205ENST00000405547 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
SNED1-205ENST00000405547 ZNF432O94892 652 aa13□□□□□ -0.33
SNED1-205ENST00000405547 VIPP01282 170 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CPN2P22792 545 aa13□□□□□ -0.33
SNED1-205ENST00000405547 RBM34P42696 430 aaKnown RBP13□□□□□ -0.33
SNED1-205ENST00000405547 NCBP2P52298 156 aaKnown RBP eCLIP13□□□□□ -0.33
SNED1-205ENST00000405547 PLA2G16P53816 162 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CDK6Q00534 326 aa13□□□□□ -0.33
SNED1-205ENST00000405547 OR4F3Q6IEY1 312 aa13□□□□□ -0.33
SNED1-205ENST00000405547 NUDT13Q86X67 352 aa13□□□□□ -0.33
SNED1-205ENST00000405547 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
SNED1-205ENST00000405547 HLA-DPB1P04440 258 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PCCBP05166 539 aa13□□□□□ -0.33
SNED1-205ENST00000405547 AVPR1BP47901 424 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CEACAM20Q6UY09 585 aa13□□□□□ -0.33
SNED1-205ENST00000405547 MINDY1Q8N5J2 469 aa13□□□□□ -0.33
SNED1-205ENST00000405547 OR6K6Q8NGW6 343 aa13□□□□□ -0.33
SNED1-205ENST00000405547 LRRC15Q8TF66 581 aa13□□□□□ -0.33
SNED1-205ENST00000405547 OSTF1Q92882 214 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PYCR2Q96C36 320 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PRKAB1Q9Y478 270 aa13□□□□□ -0.33
SNED1-205ENST00000405547 HS3ST4Q9Y661 456 aa13□□□□□ -0.33
SNED1-205ENST00000405547 TFPIP10646 304 aa13□□□□□ -0.33
SNED1-205ENST00000405547 RPS24P62847 133 aaKnown RBP13□□□□□ -0.33
SNED1-205ENST00000405547 MOB2Q70IA6 237 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CREB3L1Q96BA8 519 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CMTM7Q96FZ5 175 aa13□□□□□ -0.33
SNED1-205ENST00000405547 TMEM80Q96HE8 168 aa13□□□□□ -0.33
SNED1-205ENST00000405547 MUS81Q96NY9 551 aa13□□□□□ -0.33
SNED1-205ENST00000405547 PLEKHA1Q9HB21 404 aa13□□□□□ -0.33
SNED1-205ENST00000405547 HCN4Q9Y3Q4 1203 aa13□□□□□ -0.33
SNED1-205ENST00000405547 CDC7O00311 574 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 C10orf62Q5T681 223 aaPredicted RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 ACOT12Q8WYK0 555 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 TSGA13Q96PP4 275 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 CHIAQ9BZP6 476 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 SUV39H2Q9H5I1 410 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 CMAHPQ9Y471 501 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 PCP4L1A6NKN8 68 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 RABGGTBP53611 331 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 RBBP4Q09028 425 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 PPP1R8Q12972 351 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 SLBPQ14493 270 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNED1-205ENST00000405547 PRPF38BQ5VTL8 546 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 CPA6Q8N4T0 437 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 CEP76Q8TAP6 659 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 CYP2S1Q96SQ9 504 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 SLC6A15Q9H2J7 730 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 TPT1P8Q9HAU6 139 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 OSER1Q9NX31 292 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 DCLK1O15075 740 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 ITGA10O75578 1167 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 F8A1P23610 371 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 FLT3LGP49771 235 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 BRAT1Q6PJG6 821 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 TOMM5Q8N4H5 51 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 HSH2DQ96JZ2 352 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 CD244Q9BZW8 370 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 STOX2Q9P2F5 926 aaPredicted RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 CCRL2O00421 344 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 SAP18O00422 153 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 UBXN11Q5T124 520 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 ATG9BQ674R7 924 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 PLCZ1Q86YW0 608 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 NPAS4Q8IUM7 802 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 MKL2Q9ULH7 1088 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 TRBC2A0A5B9 178 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 KLHL33A6NCF5 533 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 GATBO75879 557 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 EIF5AL1Q6IS14 154 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 TMEM203Q969S6 136 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 RPL10LQ96L21 214 aaKnown RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 NDC1Q9BTX1 674 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 BHLHE41Q9C0J9 482 aaPredicted RBP12.99□□□□□ -0.33
SNED1-205ENST00000405547 TMLHEQ9NVH6 421 aa12.99□□□□□ -0.33
SNED1-205ENST00000405547 BTBD19C9JJ37 291 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms