RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RADILQ96JH8 1075 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 LRRC1Q9BTT6 524 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 MOV10L1Q9BXT6 1211 aaKnown RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 OPA3Q9H6K4 179 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 PELI2Q9HAT8 420 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 EQTNQ9NQ60 294 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 SH3GLB2Q9NR46 395 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 BCCIPQ9P287 314 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 FAF1Q9UNN5 650 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 PROCRQ9UNN8 238 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 ZHX2Q9Y6X8 837 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 PLXNA1Q9UIW2 1896 aa4.66□□□□□ -1.66
HMGB3P19-201ENST00000403971 MGAMO43451 1857 aa4.65□□□□□ -1.66
HMGB3P19-201ENST00000403971 A0A1W2PPM1 405 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 TCRBV21S2A2A0A5A6 115 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 ESYT2A0FGR8 921 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 DVL1O14640 695 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 CYTH3O43739 400 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 STX6O43752 255 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 SYNGR3O43761 229 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 JAK2O60674 1132 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 TBX10O75333 385 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 MED24O75448 989 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 PLEKHA8P1O95397 391 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 GGPS1O95749 300 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 LDLRP01130 860 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 MYBL1P10243 752 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 CETPP11597 493 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 SCG2P13521 617 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 PFKFB1P16118 471 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 AMD1P17707 334 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 MARK3P27448 753 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 THOP1P52888 689 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 DVL1P1P54792 670 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 GAS1P54826 345 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 PITX1P78337 314 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 ARL16Q0P5N6 197 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 SPP2Q13103 211 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 DUOXA1Q1HG43 343 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF718Q3SXZ3 478 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 PDSS1Q5T2R2 415 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 GRTP1Q5TC63 336 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 WBP2NLQ6ICG8 309 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 GALNT17Q6IS24 598 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 L3MBTL4Q8NA19 623 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 SLC24A4Q8NFF2 622 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 RDM1Q8NG50 284 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 OR5M8Q8NGP6 311 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 CCDC12Q8WUD4 166 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 MTERF3Q96E29 417 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 C8orf76Q96K31 380 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 CNDP2Q96KP4 475 aaKnown RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 C17orf77Q96MU5 243 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 CNOT10Q9H9A5 744 aaKnown RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 FKRPQ9H9S5 495 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 SLC38A7Q9NVC3 462 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 PRMT7Q9NVM4 692 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 GIMAP2Q9UG22 337 aa4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZHX1Q9UKY1 873 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P19-201ENST00000403971 MCM3APO60318 1980 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ELOVL7A1L3X0 281 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 H3BQV1 296 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZBTB5O15062 677 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 OR10H2O60403 315 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 DKC1O60832 514 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 PDE9AO76083 593 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 CELF2O95319 508 aaKnown RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 C22orf31O95567 290 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 IGHV4-39P01824 125 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 F7P08709 466 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 GOLGA8HP0CJ92 632 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF23P17027 643 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 CALML3P27482 149 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 TPD52P55327 224 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 RPL36AP83881 106 aaKnown RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 RALGDSQ12967 914 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 TRIM29Q14134 588 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZNF672Q499Z4 452 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 KLHL26Q53HC5 615 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 CST9Q5W186 159 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ATL3Q6DD88 541 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 TMPRSS11FQ6ZWK6 438 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ANO5Q75V66 913 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 DGLUCYQ7Z3D6 616 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 IQCHQ86VS3 1027 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 DCP1BQ8IZD4 617 aaKnown RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 RFLNBQ8N5W9 214 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 CCDC148Q8NFR7 591 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 TSPAN14Q8NG11 270 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 VPS33AQ96AX1 596 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 OPTNQ96CV9 577 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 SPDL1Q96EA4 605 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ALG14Q96F25 216 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 GLT8D2Q9H1C3 349 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 OR10A4Q9H209 315 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ST6GALNAC4Q9H4F1 302 aa4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 ZSCAN16Q9H4T2 348 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P19-201ENST00000403971 RABEP2Q9H5N1 569 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms