RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ACTR8Q9H981 624 aa31.96■■■□□ 2.71
CSNK1E-204ENST00000403904 PELI2Q9HAT8 420 aa31.96■■■□□ 2.71
CSNK1E-204ENST00000403904 FAM60AQ9NP50 221 aa31.96■■■□□ 2.71
CSNK1E-204ENST00000403904 OR2A25A4D2G3 310 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 WFS1O76024 890 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 LCP2Q13094 533 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 OR4K1Q8NGD4 311 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 CNDP1Q96KN2 507 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 SPNS1Q9H2V7 528 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 CLCA2Q9UQC9 943 aa31.95■■■□□ 2.71
CSNK1E-204ENST00000403904 MLYCDO95822 493 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 ARL4DP49703 201 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 NAA20P61599 178 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 HSD11B2P80365 405 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 TRAF3Q13114 568 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 TRA2AQ13595 282 aaKnown RBP eCLIP31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 NAA25Q14CX7 972 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 ISXQ2M1V0 245 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 FAM129CQ86XR2 697 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 MYLK4Q86YV6 388 aaPredicted RBP31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 PLD3Q8IV08 490 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 ZNF740Q8NDX6 193 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 DYDC1Q8WWB3 177 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 TCTN2Q96GX1 697 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 SLC41A2Q96JW4 573 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 NTMT1Q9BV86 223 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 GEMIN8Q9NWZ8 242 aaKnown RBP31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 ANKMY1Q9P2S6 941 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 UBFD1O14562 309 aaKnown RBP31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 HAT1O14929 419 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 NPHS1O60500 1241 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 H2AFYO75367 372 aaKnown RBP31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 OTCP00480 354 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 SERPINE1P05121 402 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 NELFEP18615 380 aaKnown RBP31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 CD22P20273 847 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 CCKBRP32239 447 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 PCDH1Q08174 1060 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 KCNAB1Q14722 419 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 KMT5CQ86Y97 462 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 SHCBP1LQ9BZQ2 653 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 EHD1Q9H4M9 534 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 PDE7BQ9NP56 450 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 ZNF225Q9UK10 706 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 RNF11Q9Y3C5 154 aa31.94■■■□□ 2.7
CSNK1E-204ENST00000403904 MDC1Q14676 2089 aaKnown RBP31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 FEZF1A0PJY2 475 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 CTSVO60911 334 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 CSO75390 466 aaKnown RBP31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 ARRB2P32121 409 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 RCN2Q14257 317 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 C16orf72Q14CZ0 275 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 TBCCQ15814 346 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 OR4F6Q8NGB9 312 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 FAM76AQ8TAV0 307 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 WDR34Q96EX3 536 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 PTCD3Q96EY7 689 aaKnown RBP31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 PRR11Q96HE9 360 aaPredicted RBP31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 FCRL4Q96PJ5 515 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 DEPDC7Q96QD5 511 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 DRC3Q9H069 523 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 BTRCQ9Y297 605 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 KIF26BQ2KJY2 2108 aa31.93■■■□□ 2.7
CSNK1E-204ENST00000403904 ADAMTS20P59510 1910 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 CLDN9O95484 217 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 CHRNGP07510 517 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 MLLT3P42568 568 aaPredicted RBP31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 CASP2P42575 452 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 ERVPABLB-1P60509 514 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 SH3BP2P78314 561 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 SLBPQ14493 270 aaKnown RBP eCLIP31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 FBXO42Q6P3S6 717 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 ATG14Q6ZNE5 492 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 MILR1Q7Z6M3 343 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 LSMEM2Q8N112 164 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 ZNF382Q96SR6 550 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 AIF1LQ9BQI0 150 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 MID1IP1Q9NPA3 183 aa31.92■■■□□ 2.7
CSNK1E-204ENST00000403904 MAP3K7O43318 606 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 E2F2Q14209 437 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 ARL13AQ5H913 290 aaPredicted RBP31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 LETMD1Q6P1Q0 360 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 SYVN1Q86TM6 617 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 D2HGDHQ8N465 521 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 ADAMTS14Q8WXS8 1223 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 TRMOQ9BU70 441 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 EFCAB11Q9BUY7 163 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 MANSC1Q9H8J5 431 aa31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 ZNF395Q9H8N7 513 aaPredicted RBP31.91■■■□□ 2.7
CSNK1E-204ENST00000403904 HCRTR1O43613 425 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 ITM2AO43736 263 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 EBLN1P0CF75 366 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 GRK2P25098 689 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 CSTF2P33240 577 aaKnown RBP eCLIP31.9■■■□□ 2.78e-7■■■■■ 29.8
CSNK1E-204ENST00000403904 GRK3P35626 688 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 STX3Q13277 289 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 DEFB110Q30KQ9 67 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 LIPJQ5W064 366 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 FAM219BQ5XKK7 198 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 GPRIN3Q6ZVF9 776 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms