RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	ARFGAP3	Q9NP61	516 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	AGPAT4	Q9NRZ5	378 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	LANCL2	Q9NS86	450 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ETNK2	Q9NVF9	386 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SOHLH2	Q9NX45	425 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TAS2R14	Q9NYV8	317 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	C5AR2	Q9P296	337 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZNF624	Q9P2J8	865 aa	Predicted RBP	6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MYO1A	Q9UBC5	1043 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TRIM10	Q9UDY6	481 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ST6GALNAC2	Q9UJ37	374 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ERRFI1	Q9UJM3	462 aa	Predicted RBP	6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	B3GNT3	Q9Y2A9	372 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SDK2	Q58EX2	2172 aa		6.55	□□□□□ -1.36
CEACAM1-208	ENST00000403461	OR5K3	A6NET4	321 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	WIPF3	A6NGB9	483 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PEX12	O00623	359 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HNRNPR	O43390	633 aa	Known RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MFSD11	O43934	449 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MFAP3L	O75121	409 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CLDN1	O95832	211 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RAB40AL	P0C0E4	278 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RNF224	P0DH78	156 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CYP2A7	P20853	494 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	IL1R2	P27930	398 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CD86	P42081	329 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MYL5	Q02045	173 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SP140	Q13342	867 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	XRCC4	Q13426	336 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KRT33B	Q14525	404 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KCNAB1	Q14722	419 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ELAVL1	Q15717	326 aa	Known RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	FAM214A	Q32MH5	1076 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	C3orf36	Q3SXR2	165 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZDHHC20	Q5W0Z9	365 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	FAM199X	Q6PEV8	388 aa	Predicted RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ADGRG6	Q86SQ4	1221 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	AMZ2	Q86W34	360 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SRRM1	Q8IYB3	904 aa	Known RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GLIS1	Q8NBF1	620 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CCNY	Q8ND76	341 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MIEF2	Q96C03	454 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SNRNP40	Q96DI7	357 aa	Known RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	FER1L6-AS2	Q96M78	137 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	WDR24	Q96S15	920 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NLN	Q9BYT8	704 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GPR63	Q9BZJ6	419 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TRIM7	Q9C029	511 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CHST8	Q9H2A9	424 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SYTL2	Q9HCH5	934 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TMEM140	Q9NV12	185 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HRASLS2	Q9NWW9	162 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SLC23A2	Q9UGH3	650 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	LIMA1	Q9UHB6	759 aa	Known RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TCAF1	Q9Y4C2	921 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PCDHA13	Q9Y5I0	950 aa		6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZFC3H1	O60293	1989 aa	Known RBP	6.54	□□□□□ -1.36
CEACAM1-208	ENST00000403461	UNC13C	Q8NB66	2214 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	IGHV5-51	A0A0C4DH38	117 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	LRRC53	A6NM62	1247 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MYO1F	O00160	1098 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SGTA	O43765	313 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KRT86	O43790	486 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MTX2	O75431	263 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HLA-DQB2	P05538	268 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CD63	P08962	238 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HBQ1	P09105	142 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	BRAF	P15056	766 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ALOX15	P16050	662 aa	Predicted RBP	6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HLA-DPA1	P20036	260 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	IL4R	P24394	825 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GJC1	P36383	396 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HADHA	P40939	763 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NIPAL4	Q0D2K0	466 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KLHL30	Q0D2K2	578 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GALNT3	Q14435	633 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PAFAH1B3	Q15102	231 aa	Known RBP	6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RPE65	Q16518	533 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CCDC183	Q5T5S1	534 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	C1QL3	Q5VWW1	255 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SASS6	Q6UVJ0	657 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	DOK3	Q7L591	496 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GGN	Q86UU5	652 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZNF547	Q8IVP9	402 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PRR18	Q8N4B5	295 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZADH2	Q8N4Q0	377 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RBMXL3	Q8N7X1	1067 aa	Known RBP	6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461		Q8NA96	180 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KCTD6	Q8NC69	237 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GPR26	Q8NDV2	337 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ARRDC2	Q8TBH0	407 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	C8orf49	Q96NF6	230 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TSGA13	Q96PP4	275 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RUFY1	Q96T51	708 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MAP3K3	Q99759	626 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZNF670	Q9BS34	389 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NUDT9	Q9BW91	350 aa		6.53	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HAUS4	Q9H6D7	363 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms