RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RFXANKO14593 260 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 FAM20BO75063 409 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 PGLSO95336 258 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 FABP3P05413 133 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 ADH1AP07327 375 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 EPORP19235 508 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 EFNA1P20827 205 aaPredicted RBP19.23■□□□□ 0.67
CCDC47-202ENST00000403162 TGFBR2P37173 567 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 PPP5CP53041 499 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 RHOAP61586 193 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 IL1RL1Q01638 556 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 SLC14A1Q13336 389 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 GPM6BQ13491 265 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 DNASE1L3Q13609 305 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 PROX2Q3B8N5 592 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 PLEKHG6Q3KR16 790 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 CDKL4Q5MAI5 379 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 ADGRF1Q5T601 910 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 KIAA1614Q5VZ46 1190 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 PPP2R2DQ66LE6 453 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 LGALS12Q96DT0 336 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 PITX2Q99697 317 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 AASDHPPTQ9NRN7 309 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 RPS6KA6Q9UK32 745 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 OR2A25A4D2G3 310 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 EVPLLA8MZ36 301 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 MYO1GB0I1T2 1018 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 E9PQ18 207 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 COCHO43405 550 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 MAPK1P28482 360 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 CPSF6Q16630 551 aaKnown RBP eCLIP19.23■□□□□ 0.67
CCDC47-202ENST00000403162 GGTA1PQ4G0N0 100 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 LACC1Q8IV20 430 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 RHOXF1Q8NHV9 184 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 RHNO1Q9BSD3 238 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 DSN1Q9H410 356 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 THG1LQ9NWX6 298 aaKnown RBP19.23■□□□□ 0.67
CCDC47-202ENST00000403162 GPRC5BQ9NZH0 403 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 TMED5Q9Y3A6 229 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 IRAK3Q9Y616 596 aa19.23■□□□□ 0.67
CCDC47-202ENST00000403162 NPIPB8E9PQR5 432 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 TGM5O43548 720 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 B3GALT4O96024 378 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ANXA5P08758 320 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ACPPP15309 386 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SDC1P18827 310 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 CD40LGP29965 261 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 BMP8BP34820 402 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 HOXD12P35452 270 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 IRS1P35568 1242 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 KRT20P35900 424 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ARHGEF7Q14155 803 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SMN1Q16637 294 aaKnown RBP19.22■□□□□ 0.67
CCDC47-202ENST00000403162 PGS1Q32NB8 556 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 HECTD3Q5T447 861 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 UBE2UQ5VVX9 321 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 MBOAT1Q6ZNC8 495 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 TDHQ8IZJ6 230 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 KIAA1958Q8N8K9 716 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SELENOMQ8WWX9 145 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 OVCA2Q8WZ82 227 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 CMTM7Q96FZ5 175 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 TSSK3Q96PN8 268 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SLC32A1Q9H598 525 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ZFYVE1Q9HBF4 777 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 IL26Q9NPH9 171 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 LATS2Q9NRM7 1088 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 PDP1Q9P0J1 537 aaPredicted RBP19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SCHIP1Q9P0W5 487 aaPredicted RBP19.22■□□□□ 0.67
CCDC47-202ENST00000403162 YIPF1Q9Y548 306 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 PIKFYVEQ9Y2I7 2098 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 TACR1P25103 407 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 TRPC1P48995 793 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 AP1S1P61966 158 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 CAMK1Q14012 370 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 BOP1Q14137 746 aaKnown RBP19.22■□□□□ 0.67
CCDC47-202ENST00000403162 VMACQ2NL98 169 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ATXN7L2Q5T6C5 722 aaPredicted RBP19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ERICH5Q6P6B1 374 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 HORMAD1Q86X24 394 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SCAIQ8N9R8 606 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 NELL1Q92832 810 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 PCDH12Q9NPG4 1184 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 KRT84Q9NSB2 600 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 KIAA1522Q9P206 1035 aaPredicted RBP19.22■□□□□ 0.67
CCDC47-202ENST00000403162 ANKMY1Q9P2S6 941 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 SNX6Q9UNH7 406 aa19.22■□□□□ 0.67
CCDC47-202ENST00000403162 KCNE1BA0A087WTH5 132 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 ZNF840PA6NDX5 716 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 CBSLP0DN79 551 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 CD36P16671 472 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 CBSP35520 551 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 EIF2DP41214 584 aaKnown RBP19.21■□□□□ 0.67
CCDC47-202ENST00000403162 CSNK2BP67870 215 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 VLDLRP98155 873 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 CDC20Q12834 499 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 MTAPQ13126 283 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 FAHD1Q6P587 224 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 PAGE2Q7Z2X7 111 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 SLC22A16Q86VW1 577 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms