RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 SH3GL1Q99961 368 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CPPED1Q9BRF8 314 aaPredicted RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 ASPSCR1Q9BZE9 553 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 MUC13Q9H3R2 512 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 EPS8L2Q9H6S3 715 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 TDP1Q9NUW8 608 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMC6-203ENST00000402989 PADI4Q9UM07 663 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 MICAL3Q7RTP6 2002 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 H3BM21 787 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 RTCAO00442 366 aaKnown RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 KPNA5O15131 536 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 RECQL5O94762 991 aaPredicted RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 SCELO95171 688 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CAPNS1P04632 268 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 RHOP08100 348 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 EPCAMP16422 314 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 AMD1P17707 334 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 HLCSP50747 726 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CLDN8P56748 225 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 C21orf59P57076 290 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 VBP1P61758 197 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 GRIK2Q13002 908 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 NR1D2Q14995 579 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CARTPTQ16568 116 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 UGT8Q16880 541 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 SYT16Q17RD7 645 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 FNDC3BQ53EP0 1204 aaKnown RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 C6orf141Q5SZD1 244 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 LYPLAL1Q5VWZ2 237 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 ZNF852Q6ZMS4 543 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 ZNF783Q6ZMS7 281 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 PLD3Q8IV08 490 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CACTIN-AS1Q8N1I8 211 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CRIPAKQ8N1N5 446 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 RASGEF1AQ8N9B8 481 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 ASB11Q8WXH4 323 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 IRF7Q92985 503 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CIDECQ96AQ7 238 aaPredicted RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 RBM4BQ9BQ04 359 aaKnown RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 HEPHQ9BQS7 1158 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 DUSP26Q9BV47 211 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 NTMT1Q9BV86 223 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 HERC2P3Q9BVR0 1158 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 RBM4Q9BWF3 364 aaKnown RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 EMILIN2Q9BXX0 1053 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 FAM117AQ9C073 453 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 RERGLQ9H628 205 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 CD320Q9NPF0 282 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 SERHLQ9NQF3 203 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 KRT84Q9NSB2 600 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 THG1LQ9NWX6 298 aaKnown RBP4.22□□□□□ -1.73
SMC6-203ENST00000402989 VPS29Q9UBQ0 182 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 C3orf18Q9UK00 162 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 FBXO10Q9UK96 956 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 SH2B3Q9UQQ2 575 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 SH3GLB1Q9Y371 365 aa4.22□□□□□ -1.73
SMC6-203ENST00000402989 TRBV5-4A0A0C4DH59 114 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 SLC1A7O00341 560 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 MMP20O60882 483 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 CATP04040 527 aaKnown RBP4.21□□□□□ -1.73
SMC6-203ENST00000402989 FABP3P05413 133 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 C8GP07360 202 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 CTSLP07711 333 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 HSMCR30P0CW71 290 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 ETFAP13804 333 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 MAPK1P28482 360 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 CHI3L1P36222 383 aaPredicted RBP4.21□□□□□ -1.73
SMC6-203ENST00000402989 PRIM2P49643 509 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 PLA2G16P53816 162 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 PFN3P60673 137 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 ST8SIA6P61647 398 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 MADCAM1Q13477 382 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 SLBPQ14493 270 aaKnown RBP eCLIP4.21□□□□□ -1.73
SMC6-203ENST00000402989 SPCS2Q15005 226 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 CPTPQ5TA50 214 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 TMC5Q6UXY8 1006 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 HTR3DQ70Z44 454 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 LRRC70Q7Z2Q7 622 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 CYP4Z1Q86W10 505 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 TMC8Q8IU68 726 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 FAM20CQ8IXL6 584 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 NLGN4XQ8N0W4 816 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 SPARTQ8N0X7 666 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 TTC29Q8NA56 475 aaPredicted RBP4.21□□□□□ -1.73
SMC6-203ENST00000402989 GLB1L3Q8NCI6 653 aaPredicted RBP4.21□□□□□ -1.73
SMC6-203ENST00000402989 PSD4Q8NDX1 1056 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 PIK3C3Q8NEB9 887 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 OR5K1Q8NHB7 308 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 HUS1BQ8NHY5 278 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 NEIL2Q969S2 332 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 DTNBP1Q96EV8 351 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 FOPNLQ96NB1 174 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 NODALQ96S42 347 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 PKP4Q99569 1192 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 SLC12A9Q9BXP2 914 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 OSGEPL1Q9H4B0 414 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 REEP1Q9H902 201 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 TPT1P8Q9HAU6 139 aa4.21□□□□□ -1.73
SMC6-203ENST00000402989 DCAF13Q9NV06 445 aaKnown RBP4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms