RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RPS14P62263 151 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 KIR2DS5Q14953 304 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 PKDCCQ504Y2 493 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 OLFML1Q6UWY5 402 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CEACAM20Q6UY09 585 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ZBED3Q96IU2 234 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 NOCTQ9UK39 431 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 CACNA1SQ13698 1873 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 EFCAB7A8K855 629 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 GFRA2O00451 464 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 C2P06681 752 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CD48P09326 243 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CD46P15529 392 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 GRIA3P42263 894 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ZNF844Q08AG5 666 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 RBBP4Q09028 425 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 DCTN2Q13561 401 aaKnown RBP7.73□□□□□ -1.17
USP47-203ENST00000399455 DGUOKQ16854 277 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 DEFB133Q30KQ1 61 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 RAET1LQ5VY80 246 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 UNC5DQ6UXZ4 953 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 GRHL3Q8TE85 626 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 TWSG1Q9GZX9 223 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 DCLRE1BQ9H816 532 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 PDP2Q9P2J9 529 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ADAMTS5Q9UNA0 930 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 ENTPD2Q9Y5L3 495 aa7.73□□□□□ -1.17
USP47-203ENST00000399455 BAZ2AQ9UIF9 1905 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 ELOVL7A1L3X0 281 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 TACSTD2P09758 323 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CDH1P12830 882 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 GALNT2Q10471 571 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 GPR68Q15743 365 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 FAM69BQ5VUD6 431 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 TMIGD1Q6UXZ0 262 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ZNF550Q7Z398 422 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CMC1Q7Z7K0 106 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ZDHHC14Q8IZN3 488 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 TMIEQ8NEW7 156 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ORAI3Q9BRQ5 295 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 IFT27Q9BW83 186 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 NDUFA13Q9P0J0 144 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 FAM92AA1XBS5 289 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 TNFRSF11BO00300 401 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 OR4F21O95013 312 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 KCNK5O95279 499 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 PGM3O95394 542 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 PABPC4LP0CB38 370 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 ZNF28P17035 718 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 PRPS1L1P21108 318 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 STK19P49842 368 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 GFOD2Q3B7J2 385 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 LIN54Q6MZP7 749 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 APLFQ8IW19 511 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 TBC1D21Q8IYX1 336 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ZNF384Q8TF68 577 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 APOOQ9BUR5 198 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 IKZF4Q9H2S9 585 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 GPN2Q9H9Y4 310 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 PGAP2Q9UHJ9 254 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CCL22O00626 93 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DLX3O60479 287 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 UNGP13051 313 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 ICAM2P13598 275 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 BDH1Q02338 343 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 RPA4Q13156 261 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 C1orf189Q5VU69 101 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 NCEH1Q6PIU2 408 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DPY19L3Q6ZPD9 716 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CPXM2Q8N436 756 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 SSR3Q9UNL2 185 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 A0A0D9SEW6 157 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 LINC01553A4QN01 128 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 TBX1O43435 398 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CHRNB2P17787 502 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CHRNA4P43681 627 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 RAB2AP61019 212 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ZNF846Q147U1 533 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 FAM189A2Q15884 450 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 NANOGNBQ7Z5D8 188 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CLNKQ7Z7G1 428 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 RASGEF1CQ8N431 466 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 SEC14L1Q92503 715 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ELSPBP1Q96BH3 223 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 FER1L6-AS2Q96M78 137 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 MTERF1Q99551 399 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 PISDQ9UG56 409 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 UBE2QL1A1L167 161 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 PDCD5O14737 125 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 TCEA3O75764 348 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 UBTFL6P0CB48 400 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 USP46P62068 366 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 HERVK_113P63132 956 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 POU6F2P78424 691 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 SCARB2Q14108 478 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms