RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CST11Q9H112 138 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 GDE1Q9NZC3 331 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 A0A1W2PRB8 838 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 H3BSH0 61 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 NPC1O15118 1278 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ADAMDEC1O15204 470 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 RENP00797 406 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 TAS2R39P59534 338 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 XIAPP98170 497 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 PTP4A2Q12974 167 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 TRMT10BQ6PF06 316 aaKnown RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 HAVCR1Q96D42 359 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 RUVBL1Q9Y265 456 aaKnown RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 WASHC1A8K0Z3 465 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 WASH3PC4AMC7 463 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 POP7O75817 140 aaKnown RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 POLR2CP19387 275 aaPredicted RBP13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 PNLIPRP1P54315 467 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 CASP6P55212 293 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 C1orf61Q13536 156 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 WASH2PQ6VEQ5 465 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 RTL10Q7L3V2 364 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ARMC10Q8N2F6 343 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 CAMKVQ8NCB2 501 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 FOXJ1Q92949 421 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 ZDHHC3Q9NYG2 299 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 MALT1Q9UDY8 824 aa13.87□□□□□ -0.19
PCDHA11-201ENST00000398640 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 CPNE3O75131 537 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 LCA5LO95447 670 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 KLK1P06870 262 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 PRPS2P11908 318 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 OGNP20774 298 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 RPS9P46781 194 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 NTHL1P78549 312 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 LCN1P1Q5VSP4 162 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 KBTBD6Q86V97 674 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 GJD3Q8N144 294 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 OXR1Q8N573 874 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 DCAF4L2Q8NA75 395 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TXNDC5Q8NBS9 432 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 GORASP1Q9BQQ3 440 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TPSD1Q9BZJ3 242 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 KDELR3O43731 214 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TULP3O75386 442 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 ATP1B2P14415 290 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 CCNHP51946 323 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 VBP1P61758 197 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 INCA1Q0VD86 236 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 SCARB2Q14108 478 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 EIPR1Q53HC9 387 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 NXPE1Q8N323 547 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 OR10T2Q8NGX3 314 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 SEC61A2Q9H9S3 476 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TRPV5Q9NQA5 729 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 SMPD3Q9NY59 655 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 FNIP2Q9P278 1114 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 NOCTQ9UK39 431 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 CORO1CQ9ULV4 474 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 PAPPA2Q9BXP8 1791 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 C2orf78A6NCI8 922 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 DHFRP00374 187 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 CSTF1Q05048 431 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF542PQ5EBM4 170 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 SIRPB2Q5JXA9 342 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TMEM214Q6NUQ4 689 aaKnown RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF611Q8N823 705 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 HM13Q8TCT9 377 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC35F5Q8WV83 523 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 GATA5Q9BWX5 397 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 GPR34Q9UPC5 381 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TCRBV7S3A2A0A539 114 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 K7EPI3 171 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 SCDO00767 359 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 LRP8Q14114 963 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 PLEKHG6Q3KR16 790 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 LRRC66Q68CR7 880 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 C1orf94Q6P1W5 598 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 PAQR3Q6TCH7 311 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 C7orf26Q96N11 449 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 TCF7L1Q9HCS4 588 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 IL1RAPQ9NPH3 570 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 MKKSQ9NPJ1 570 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 CENPMQ9NSP4 180 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 OAZ2O95190 189 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 DRD1P21728 446 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 HMGCS1Q01581 520 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 OLIG2Q13516 323 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF613Q6PF04 617 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 ATOH1Q92858 354 aaPredicted RBP13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF180Q9UJW8 692 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 CNTN6Q9UQ52 1028 aa13.86□□□□□ -0.19
PCDHA11-201ENST00000398640 A0A1W2PP55 124 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms