RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM198Q66K66 360 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 LAIR1Q6GTX8 287 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 MTDHQ86UE4 582 aaKnown RBP20.39■□□□□ 0.85
CPNE1-204ENST00000397443 OOSP2Q86WS3 158 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 Q8N9G6 341 aaPredicted RBP20.39■□□□□ 0.85
CPNE1-204ENST00000397443 FRG2BQ96QU4 278 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 OR2A14Q96R47 310 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 DPH7Q9BTV6 452 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 EFCAB11Q9BUY7 163 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 FAM86C1Q9NVL1 165 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 SPEGQ15772 3267 aa20.39■□□□□ 0.85
CPNE1-204ENST00000397443 YKT6O15498 198 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 SIGLEC6O43699 453 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 NCF2P19878 526 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-204ENST00000397443 INHBCP55103 352 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 HMGCS1Q01581 520 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 TUBB3Q13509 450 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 KIR2DS3Q14952 304 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 TBCCQ15814 346 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 GALNTL6Q49A17 601 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 PAGE2BQ5JRK9 111 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 NKAIN2Q5VXU1 208 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 ARMC6Q6NXE6 501 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 ZCCHC8Q6NZY4 707 aaKnown RBP20.38■□□□□ 0.85
CPNE1-204ENST00000397443 MED27Q6P2C8 311 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 OR4C6Q8NH72 309 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 SLC22A18Q96BI1 424 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 DUSP23Q9BVJ7 150 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-204ENST00000397443 AKTIPQ9H8T0 292 aa20.38■□□□□ 0.85
CPNE1-204ENST00000397443 OR5K3A6NET4 321 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 C2orf74A8MZ97 194 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PEX11AO75192 247 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 CASP2P42575 452 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 SF3A2Q15428 464 aaKnown RBP20.37■□□□□ 0.85
CPNE1-204ENST00000397443 HIST2H2ACQ16777 129 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-204ENST00000397443 HIST2H2AA3Q6FI13 130 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 OR7G3Q8NG95 312 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 APOLD1Q96LR9 279 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 EHD1Q9H4M9 534 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PADI4Q9UM07 663 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 RP1P56715 2156 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 LNP1A1A4G5 178 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 CPED1A4D0V7 1026 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 FAM221BA6H8Z2 402 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PROS1P07225 676 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 HOXB3P14651 431 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-204ENST00000397443 OR1D5P58170 312 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 CSNK1G2P78368 415 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PCDH1Q08174 1060 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 IMPG1Q17R60 797 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PLA2G2CQ5R387 149 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 IRGCQ6NXR0 463 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 FAM129CQ86XR2 697 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 ABHD11Q8NFV4 315 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 FLVCR1-AS1Q8TAF5 88 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 WDR34Q96EX3 536 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 MAGEB10Q96LZ2 347 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-204ENST00000397443 AIF1LQ9BQI0 150 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 ZMYND15Q9H091 742 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PELI2Q9HAT8 420 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 PCDHGA11Q9Y5H2 935 aa20.37■□□□□ 0.85
CPNE1-204ENST00000397443 MUC6Q6W4X9 2439 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 LILRA5A6NI73 299 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 CCNDBP1O95273 360 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 PVRP15151 417 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 MAGP20916 626 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 GRIA3P42263 894 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 CYP4F2P78329 520 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 NR6A1Q15406 480 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 AMZ1Q400G9 498 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 XKR7Q5GH72 579 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 SPESP1Q6UW49 350 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 TMIGD1Q6UXZ0 262 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 SUMF1Q8NBK3 374 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 HUS1BQ8NHY5 278 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 WDR20Q8TBZ3 569 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 USP7Q93009 1102 aa20.36■□□□□ 0.85
CPNE1-204ENST00000397443 MAELQ96JY0 434 aaKnown RBP20.36■□□□□ 0.85
CPNE1-204ENST00000397443 H0YIV9 168 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 CASC3O15234 703 aaKnown RBP20.35■□□□□ 0.85
CPNE1-204ENST00000397443 NUDT21O43809 227 aaKnown RBP20.35■□□□□ 0.85
CPNE1-204ENST00000397443 RETP07949 1114 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 GLB1P16278 677 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 ABATP80404 500 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 SPDYAQ5MJ70 313 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 Q6ZSR9 355 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 KRT78Q8N1N4 520 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 CEP70Q8NHQ1 597 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 ATOH1Q92858 354 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-204ENST00000397443 CATSPER2Q96P56 530 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 ACPTQ9BZG2 426 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 NMUR2Q9GZQ4 415 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 ARMCX1Q9P291 453 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 UNC13CQ8NB66 2214 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 HAT1O14929 419 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 OR1F1O43749 312 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 STATHP02808 62 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 LSSP48449 732 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 LAPTM5Q13571 262 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms