RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 FAM169AQ9Y6X4 670 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 ITPR3Q14573 2671 aa8.34□□□□□ -1.07
CAPN3-208ENST00000397204 NF1P21359 2839 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 MAP1AP78559 2803 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 LOC105369274A0A096LPK9 316 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 LOC102723532A0A0G2JNH3 316 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 A0A0J9YVX5 310 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PRMT5O14744 637 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PRPF4O43172 522 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PHF2O75151 1096 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 MED26O95402 600 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 C1orf105O95561 183 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 EIF2S1P05198 315 aaKnown RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 COX6A1P12074 109 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 FBLP22087 321 aaKnown RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 KCNK10P57789 538 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PRAMEP78395 509 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 RELAQ04206 551 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF630Q2M218 657 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 SKOR2Q2VWA4 1001 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 VWA2Q5GFL6 755 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 FRMPD2BQ6IN97 320 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 RPTNQ6XPR3 784 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PPP1R21Q6ZMI0 780 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF534Q76KX8 674 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 MRGPRGQ86SM5 289 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 TAX1BP1Q86VP1 789 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ALDH16A1Q8IZ83 802 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 OR4N4Q8N0Y3 316 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF808Q8N4W9 903 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 METTL27Q8N6F8 245 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 LRRC57Q8N9N7 239 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 OR2L3Q8NG85 312 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 SUN3Q8TAQ9 357 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 BRIX1Q8TDN6 353 aaKnown RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ITLN2Q8WWU7 325 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 C8orf44Q96CB5 159 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 FOPNLQ96NB1 174 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PANX3Q96QZ0 392 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ZFYVE21Q9BQ24 234 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 TMEM121Q9BTD3 319 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 TGIF2Q9GZN2 237 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 RIC8BQ9NVN3 520 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 PLA2G3Q9NZ20 509 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 STMN3Q9NZ72 180 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 ABI3Q9P2A4 366 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 SLC2A6Q9UGQ3 507 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 CIDEBQ9UHD4 219 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 GDF2Q9UK05 429 aaPredicted RBP8.33□□□□□ -1.08
CAPN3-208ENST00000397204 AMFRQ9UKV5 643 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 SPG11Q96JI7 2443 aa8.33□□□□□ -1.08
CAPN3-208ENST00000397204 CROCCQ5TZA2 2017 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 LOC102723996A0A087X1L8 192 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 IGHV1-45A0A0A0MS14 117 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 TRGV8A0A0C4DH27 118 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 OR2A25A4D2G3 310 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 IQCF5A8MTL0 148 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 MIF4GDA9UHW6 222 aaKnown RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 IDSB3KWA1 339 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 CCL21O00585 134 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 TXNDC9O14530 226 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 CD3EAPO15446 510 aaKnown RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 UNC5CO95185 931 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 RASAL1O95294 804 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 IPO7O95373 1038 aaKnown RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 HEXBP07686 556 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 ERVK-10P10266 1014 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 PKMP14618 531 aaKnown RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 AGAP20933 346 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 HTR1EP28566 365 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 GRNP28799 593 aaKnown RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 CMPK1P30085 196 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 FDFT1P37268 417 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 SLC26A3P40879 764 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 CA7P43166 264 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 RBPJQ06330 500 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 PRTGQ2VWP7 1150 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 GARNL3Q5VVW2 1013 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 PTRHD1Q6GMV3 140 aaKnown RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 CNSTQ6PJW8 725 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 BNC2Q6ZN30 1099 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 RNF44Q7L0R7 432 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 OTOAQ7RTW8 1153 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 GDF7Q7Z4P5 450 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 LRRC6Q86X45 466 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 PRSS58Q8IYP2 241 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 SIRT6Q8N6T7 355 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF778Q96MU6 729 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 MIPEPQ99797 713 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 MESP1Q9BRJ9 268 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 DPH7Q9BTV6 452 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF700Q9H0M5 742 aa8.32□□□□□ -1.08
CAPN3-208ENST00000397204 MKKSQ9NPJ1 570 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-208ENST00000397204 C14orf105Q9NVL8 296 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms