RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SRPK3Q9UPE1 567 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 BTRCQ9Y297 605 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 DHRS7Q9Y394 339 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 DNMT3AQ9Y6K1 912 aaPredicted RBP13.17□□□□□ -0.3
SEC13-205ENST00000397101 ADGRG4Q8IZF6 3080 aa13.17□□□□□ -0.3
SEC13-205ENST00000397101 APCP25054 2843 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 OR5K3A6NET4 321 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 COPEO14579 308 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 SPAG7O75391 227 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 ALDOAP04075 364 aaKnown RBP13.16□□□□□ -0.3
SEC13-205ENST00000397101 CAPN1P07384 714 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 PAQR3Q6TCH7 311 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 CPNE9Q8IYJ1 553 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
SEC13-205ENST00000397101 ST6GALNAC3Q8NDV1 305 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 SCYL1Q96KG9 808 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
SEC13-205ENST00000397101 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 EURLQ9NYK6 297 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 RUVBL2Q9Y230 463 aaKnown RBP13.16□□□□□ -0.3
SEC13-205ENST00000397101 WDR37Q9Y2I8 494 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 C2CD3Q4AC94 2353 aa13.16□□□□□ -0.3
SEC13-205ENST00000397101 MGAT4DA6NG13 374 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 HMGB1P1B2RPK0 211 aaPredicted RBP13.15□□□□□ -0.3
SEC13-205ENST00000397101 SGTAO43765 313 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 IPO13O94829 963 aaKnown RBP13.15□□□□□ -0.3
SEC13-205ENST00000397101 SYF2O95926 243 aaKnown RBP13.15□□□□□ -0.3
SEC13-205ENST00000397101 IGHEP01854 428 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 ALPPP05187 535 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 GSTM1P09488 218 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CCDC166P0CW27 439 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 AOAHP28039 575 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CCR7P32248 378 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.3
SEC13-205ENST00000397101 CCT5P48643 541 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CLCN7P51798 805 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 PER3P56645 1201 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 IL2P60568 153 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 GSTM4Q03013 218 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CSHL1Q14406 222 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 KLC3Q6P597 504 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 FAM198BQ6UWH4 519 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CCDC91Q7Z6B0 441 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 EXOC3L1Q86VI1 746 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 RAB43Q86YS6 212 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 MYO1HQ8N1T3 1032 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
SEC13-205ENST00000397101 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 HM13Q8TCT9 377 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 CD200R1Q8TD46 325 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 MZB1Q8WU39 189 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 ASZ1Q8WWH4 475 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 ALKBH8Q96BT7 664 aaKnown RBP13.15□□□□□ -0.3
SEC13-205ENST00000397101 LINGO1Q96FE5 620 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 SLC30A3Q99726 388 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 MED4Q9NPJ6 270 aa13.15□□□□□ -0.3
SEC13-205ENST00000397101 C17orf113A0A1B0GUU1 675 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 PABPN1LA6NDY0 278 aaKnown RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 LIN7AO14910 233 aaPredicted RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 LTA4HP09960 611 aaKnown RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 SLC35E2BP0CK96 405 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 CD9P21926 228 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 ITGA3P26006 1051 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 KPNA2P52292 529 aaKnown RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 SOX8P57073 446 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 IRF9Q00978 393 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 MYBPC3Q14896 1274 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 NCF4Q15080 339 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 PLCL1Q15111 1095 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 ZKSCAN8Q15776 578 aaPredicted RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 RPE65Q16518 533 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 FAM83EQ2M2I3 478 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 Q6ZS92 163 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 OOSP2Q86WS3 158 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 SPATA6LQ8N4H0 392 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 CFAP61Q8NHU2 1237 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 KCTD4Q8WVF5 259 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 FER1L6-AS2Q96M78 137 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 UNKQ9C0B0 810 aaKnown RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 RUBCNLQ9H714 662 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 COG4Q9H9E3 785 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 FANCEQ9HB96 536 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 AGPAT4Q9NRZ5 378 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 HRASLS2Q9NWW9 162 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 KLHL42Q9P2K6 505 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 DCDC2Q9UHG0 476 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms