RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 AGPSO00116 658 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 GRID2O43424 1007 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 CH25HO95992 272 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 MMP8P22894 467 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 E2F2Q14209 437 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 NNATQ16517 81 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 LPCAT4Q643R3 524 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 FBXL22Q6P050 247 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 B3GNT6Q6ZMB0 384 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 CIB1Q99828 191 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 TRMOQ9BU70 441 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 DEFB126Q9BYW3 111 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 PRTFDC1Q9NRG1 225 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 HEPACAM2A8MVW5 462 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 H3BQ06 376 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 K7EPI3 171 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 MID1O15344 667 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 OPN1SWP03999 348 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 AZGP1P25311 298 aaKnown RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 UFD1Q92890 307 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 PGM2Q96G03 612 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 FUBP3Q96I24 572 aaKnown RBP eCLIP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 SLC35F4A4IF30 521 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 C2orf74A8MZ97 194 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 S100A10P60903 97 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 OGDHQ02218 1023 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 CRTC2Q53ET0 693 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 FRS2Q8WU20 508 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 SORCS3Q9UPU3 1222 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 EME2A4GXA9 379 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 MAN2B1O00754 1011 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 VEGFDO43915 354 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 ARHGAP1Q07960 439 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 C22orf39Q6P5X5 142 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 TRAPPC6BQ86SZ2 158 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 FOXO6A8MYZ6 492 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 THRBP10828 461 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 DNAJA1P31689 397 aaKnown RBP16.99■□□□□ 0.31
MCF2L-208ENST00000397030 FOXR2Q6PJQ5 311 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 SDR16C5Q8N3Y7 309 aa16.99■□□□□ 0.31
MCF2L-208ENST00000397030 TMEM265A0A087WTH1 108 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 HCRTO43612 131 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 GALTP07902 379 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PXNP49023 591 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PRKD1Q15139 912 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 ANKRD22Q5VYY1 191 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 ZNF852Q6ZMS4 543 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 LAPTM4BQ86VI4 370 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 KCNK13Q9HB14 408 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PPP4R1LQ9P1A2 415 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 ZFR2Q9UPR6 939 aaKnown RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 DHFRP00374 187 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 SRCP12931 536 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 DSTNP60981 165 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 RBM44Q6ZP01 1051 aaKnown RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 APLFQ8IW19 511 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 TMEM68Q96MH6 324 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PTCHD1Q96NR3 888 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 IL23AQ9NPF7 189 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 GNG8Q9UK08 70 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 OR4D2P58180 307 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 FASTKD3Q14CZ7 662 aaKnown RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 ZNF761Q86XN6 746 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 MFSD2AQ8NA29 543 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 OR2T34Q8NGX1 318 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 OR2T3Q8NH03 318 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 OSBPL11Q9BXB4 747 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 ERVK-5Q9HDB9 667 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 C12orf4Q9NQ89 552 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PNPLA3Q9NST1 481 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 SOD2P04179 222 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 CDH1P12830 882 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 HMGCS1Q01581 520 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PLGLAQ15195 96 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 C1orf52Q8N6N3 182 aaKnown RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 MCFD2Q8NI22 146 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PXYLP1Q8TE99 480 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 SAMD11Q96NU1 681 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 SLC5A7Q9GZV3 580 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 FN3KQ9H479 309 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 SPATA7Q9P0W8 599 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PCDHGB7Q9Y5F8 929 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 FAM237AA0A1B0GTK4 181 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 ADAMDEC1O15204 470 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 KAT7O95251 611 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 PLATP00750 562 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 RPS21P63220 83 aaKnown RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 CCDC80Q76M96 950 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 KCNC2Q96PR1 638 aa16.98■□□□□ 0.31
MCF2L-208ENST00000397030 APOBEC3BQ9UH17 382 aaKnown RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 CORO1CQ9ULV4 474 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-208ENST00000397030 FAM240BA0A1B0GVZ2 78 aa16.97■□□□□ 0.31
MCF2L-208ENST00000397030 ENTPD5O75356 428 aa16.97■□□□□ 0.31
MCF2L-208ENST00000397030 CNTN5O94779 1100 aa16.97■□□□□ 0.31
MCF2L-208ENST00000397030 FASLGP48023 281 aa16.97■□□□□ 0.31
MCF2L-208ENST00000397030 AP3S2P59780 193 aa16.97■□□□□ 0.31
MCF2L-208ENST00000397030 ARL13AQ5H913 290 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms