RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FKBP9P1Q75LS8 142 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 LMNTD1Q8N9Z9 388 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 ARRDC3Q96B67 414 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 SDCCAG3Q96C92 435 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 SAMD11Q96NU1 681 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 PANX1Q96RD7 426 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 CLIC1O00299 241 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 LAMP1P11279 417 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 EFNA1P20827 205 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-205ENST00000396551 VAC14Q08AM6 782 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 TMEM259Q4ZIN3 620 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 C1QTNF12Q5T7M4 302 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 SERPINA11Q86U17 422 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 ERI1Q8IV48 349 aaKnown RBP16.01■□□□□ 0.15
TRIM39-205ENST00000396551 ZZZ3Q8IYH5 903 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 OR8J2Q8NGG1 315 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 OR5K1Q8NHB7 308 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 ISOC1Q96CN7 298 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 RDH12Q96NR8 316 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 OCEL1Q9H607 264 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 CDC14AQ9UNH5 594 aa16.01■□□□□ 0.15
TRIM39-205ENST00000396551 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
TRIM39-205ENST00000396551 HEMK1Q9Y5R4 338 aaPredicted RBP16.01■□□□□ 0.15
TRIM39-205ENST00000396551 PLK4O00444 970 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 RECQL5O94762 991 aaPredicted RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 VIPR2P41587 438 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 C21orf58P58505 322 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ESRRGP62508 458 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ACSM2AQ08AH3 577 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ACSM2BQ68CK6 577 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 KCTD8Q6ZWB6 473 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ADHFE1Q8IWW8 467 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 C1orf52Q8N6N3 182 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 OR7G3Q8NG95 312 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 WFIKKN2Q8TEU8 576 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 AASDHPPTQ9NRN7 309 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 SH2B3Q9UQQ2 575 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 PSMD11O00231 422 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 HOXC11O43248 304 aaPredicted RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 KCNK5O95279 499 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 C1orf105O95561 183 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 CPSF4O95639 269 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 MAGEA2P43356 314 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 SLC6A11P48066 632 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 SPIDRQ14159 915 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 RAB39AQ14964 217 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ZCCHC8Q6NZY4 707 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 GALNT10Q86SR1 603 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 PTOV1Q86YD1 416 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 CELF5Q8N6W0 485 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 NEIL2Q969S2 332 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 POLR1BQ9H9Y6 1135 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 LINC01553A4QN01 128 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ST8SIA6P61647 398 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 KCNAB2Q13303 367 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 PPIGQ13427 754 aaKnown RBP eCLIP16■□□□□ 0.159e-8■□□□□ 10.3
TRIM39-205ENST00000396551 E2F2Q14209 437 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 MYBPC3Q14896 1274 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 RBBP5Q15291 538 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 ZNF621Q6ZSS3 439 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ETFBKMTQ8IXQ9 262 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 HUS1BQ8NHY5 278 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ZNF480Q8WV37 535 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 ZFYVE19Q96K21 471 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 RBM4BQ9BQ04 359 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 RBM4Q9BWF3 364 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 BRF2Q9HAW0 419 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 FAM120CQ9NX05 1096 aaKnown RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 TMEFF2Q9UIK5 374 aaPredicted RBP16■□□□□ 0.15
TRIM39-205ENST00000396551 SLC27A6Q9Y2P4 619 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 PCDHGA8Q9Y5G5 932 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 U3KQV3 271 aa16■□□□□ 0.15
TRIM39-205ENST00000396551 EVPLLA8MZ36 301 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 H3BM21 787 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 SCAMP2O15127 329 aaKnown RBP15.99■□□□□ 0.15
TRIM39-205ENST00000396551 CCNDBP1O95273 360 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 HSD3B1P14060 373 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 GPX2P18283 190 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 HSD3B2P26439 372 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 C16orf72Q14CZ0 275 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 C11orf91Q3C1V1 193 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 LRRC23Q53EV4 343 aaPredicted RBP15.99■□□□□ 0.15
TRIM39-205ENST00000396551 SLCO4C1Q6ZQN7 724 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 THAP5Q7Z6K1 395 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 SFTPA1Q8IWL2 248 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 EID3Q8N140 333 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 SH3KBP1Q96B97 665 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 ARMC5Q96C12 935 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 OTOL1A6NHN0 477 aaPredicted RBP15.99■□□□□ 0.15
TRIM39-205ENST00000396551 IL7RP16871 459 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 VMACQ2NL98 169 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 GAB4Q2WGN9 574 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 ZDHHC21Q8IVQ6 265 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
TRIM39-205ENST00000396551 CHTF18Q8WVB6 975 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 C12orf43Q96C57 262 aaKnown RBP15.99■□□□□ 0.15
TRIM39-205ENST00000396551 OR2AG1Q9H205 316 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 CXorf21Q9HAI6 301 aa15.99■□□□□ 0.15
TRIM39-205ENST00000396551 GABRR3A8MPY1 467 aa15.98■□□□□ 0.15
TRIM39-205ENST00000396551 ZNF197O14709 1029 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms