RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CYC1P08574 325 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 KDELR1P24390 212 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 ACRV1P26436 265 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 ZFP36L2P47974 494 aaKnown RBP12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 ZNF140P52738 457 aaPredicted RBP12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 MAPKAPK3Q16644 382 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 SYT16Q17RD7 645 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 SLC25A35Q3KQZ1 300 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 GPR33Q49SQ1 333 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 FLYWCH1Q4VC44 716 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 RTL6Q6ICC9 239 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 FBXO42Q6P3S6 717 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 NPNTQ6UXI9 565 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 OR2L8Q8NGY9 312 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 M1APQ8TC57 530 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 FAM222BQ8WU58 562 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 FCRL5Q96RD9 977 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 SARGQ9BW04 601 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 KCNK13Q9HB14 408 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 IMPACTQ9P2X3 320 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 Q9UFV3 132 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 LIMA1Q9UHB6 759 aaKnown RBP12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 CDC14AQ9UNH5 594 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 FAM215AQ9Y5M1 114 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 PRSS21Q9Y6M0 314 aa12.87□□□□□ -0.35
VCPKMT-201ENST00000395859 A0A0J9YVX5 310 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 USP27XA6NNY8 438 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 SYT5O00445 386 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 HS6ST1O60243 411 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 AP2A2O94973 939 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 F12P00748 615 aaPredicted RBP12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 CYP1A2P05177 515 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 PRSS56P0CW18 603 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 GLI4P10075 376 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 ADH7P40394 386 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 PEX19P40855 299 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 SNRPNP63162 240 aaKnown RBP12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 PPP2R2BQ00005 443 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 UBXN1Q04323 297 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 SF1Q15637 639 aaKnown RBP12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 SERPINA9Q86WD7 417 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 C2orf73Q8N5S3 287 aaPredicted RBP12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 IL17FQ96PD4 163 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 CYTH2Q99418 400 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 GORASP1Q9BQQ3 440 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 TRIM5Q9C035 493 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 SLC6A16Q9GZN6 736 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 AIPL1Q9NZN9 384 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
VCPKMT-201ENST00000395859 A0A1W2PPR1 153 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 OR2A25A4D2G3 310 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 C5orf60A6NFR6 353 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 LRRC53A6NM62 1247 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 C2orf81A6NN90 581 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 MYO1FO00160 1098 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 TFECO14948 347 aaPredicted RBP12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 PRPF4O43172 522 aaKnown RBP eCLIP12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 KDM1AO60341 852 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 ITGALP20701 1170 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 TRHRP34981 398 aaPredicted RBP12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 GJC1P36383 396 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 OC90Q02509 493 aaPredicted RBP12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 MPP3Q13368 585 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 GXYLT1Q4G148 440 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 RANBP10Q6VN20 620 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 VSIG1Q86XK7 387 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 ZFP62Q8NB50 900 aaPredicted RBP12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 OR52N2Q8NGI0 321 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 MEGF8Q7Z7M0 2845 aa12.85□□□□□ -0.35
VCPKMT-201ENST00000395859 HEATR5BQ9P2D3 2071 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 H0YGG7 62 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 CCL22O00626 93 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 PRMT3O60678 531 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 AGTP01019 485 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 ACVR2AP27037 513 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 PSMB5P28074 263 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 ADRA1AP35348 466 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 RFC3P40938 356 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 ZNF75DP51815 510 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 ARF3P61204 181 aaPredicted RBP12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 PCBP2Q15366 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 EXT1Q16394 746 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 DNAJC21Q5F1R6 531 aaKnown RBP12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 Q5PR19 223 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 SULF2Q8IWU5 870 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 PIANPQ8IYJ0 282 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 SLC5A8Q8N695 610 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 OR2L3Q8NG85 312 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 OR5M3Q8NGP4 307 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms