RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 DDX31Q9H8H2 851 aaKnown RBP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 GPR173Q9NS66 373 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 COMMD8Q9NX08 183 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 NINJ2Q9NZG7 142 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 TRMT6Q9UJA5 497 aaKnown RBP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 KRT87PA6NCN2 255 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 ANKDD1BA6NHY2 528 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 C2orf81A6NN90 581 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 C2CD4DB7Z1M9 353 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 CAPN9O14815 690 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 ACSL4O60488 711 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 PAPSS2O95340 614 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 PIGNO95427 931 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 IGHV4-31P0DP07 118 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 GP1BBP13224 206 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 EFNA1P20827 205 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 LUMP51884 338 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 PITX1P78337 314 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 ILF3Q12906 894 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 SMC1AQ14683 1233 aaKnown RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 KIF19Q2TAC6 998 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 GPR33Q49SQ1 333 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 LRRC38Q5VT99 294 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 ASPGQ86U10 573 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 DNAJC22Q8N4W6 341 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 NOA1Q8NC60 698 aaKnown RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 OR52E1Q8NGJ3 308 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 URGCPQ8TCY9 931 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 TSACCQ96A04 125 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 PGM2Q96G03 612 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 RBM41Q96IZ5 413 aaKnown RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 TSSK2Q96PF2 358 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 PIGQQ9BRB3 760 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 OR2B2Q9GZK3 357 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 UBQLN3Q9H347 655 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 RIMS4Q9H426 269 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 FAM207AQ9NSI2 230 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 MAD2L2Q9UI95 211 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 RPH3AQ9Y2J0 694 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 RIPK3Q9Y572 518 aa4.58□□□□□ -1.68
HMGB1P10-201ENST00000395823 DHX29Q7Z478 1369 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 A0A1W2PS18 150 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 MYMKA6NI61 221 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC9B1P1A6NJY1 282 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 INO80B-WBP1J3KQ70 363 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 O00370 1275 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC22A2O15244 555 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SMAD6O43541 496 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRKRAO75569 313 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 RAD51DO75771 328 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 STAM2O75886 525 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 CXCL14O95715 111 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC4A1P02730 911 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 APOHP02749 345 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 ALPLP05186 524 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 FGF5P12034 268 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 IL15P40933 162 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SMSP52788 366 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 MAZP56270 477 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 NANOS2P60321 138 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 GFPT1Q06210 699 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 TRAP1Q12931 704 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 DNAJC21Q5F1R6 531 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SLC25A53Q5H9E4 307 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 ETFRF1Q6IPR1 90 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRSS57Q6UWY2 283 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 MARK2Q7KZI7 788 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 LRTM2Q8N967 370 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 CCDC63Q8NA47 563 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SECTM1Q8WVN6 248 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 TBC1D31Q96DN5 1066 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 DTD2Q96FN9 168 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 SCRN2Q96FV2 425 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZNF583Q96ND8 569 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 RUNDC3BQ96NL0 473 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 PSD2Q9BQI7 771 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 TMEM204Q9BSN7 226 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 XPO4Q9C0E2 1151 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 EVA1AQ9H8M9 152 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZBTB20Q9HC78 741 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 RAVER2Q9HCJ3 691 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 FGF21Q9NSA1 209 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 CHKBQ9Y259 395 aa4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 TDRKHQ9Y2W6 561 aaKnown RBP4.57□□□□□ -1.68
HMGB1P10-201ENST00000395823 PFASO15067 1338 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 H3BMM5 538 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 CACNB4O00305 520 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRPSAP2O60256 369 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRKNO60260 465 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 B3GALNT1O75752 331 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 LETM1O95202 739 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 TSHBP01222 138 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 ALPPP05187 535 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 FRMD6-AS1P0C7T7 363 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 FAM200BP0CF97 657 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 ALPPL2P10696 532 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 DARSP14868 501 aaKnown RBP4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 AHCYP23526 432 aa4.56□□□□□ -1.68
HMGB1P10-201ENST00000395823 CDKN2AP42771 156 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms