RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SDHDO14521 159 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 FFAR3O14843 346 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 GPR42O15529 346 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 PRICKLE3O43900 615 aaPredicted RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 LINC00032P0C843 101 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 SCTRP47872 440 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 MAZP56270 477 aaKnown RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 CSTF3Q12996 717 aaKnown RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 SLBPQ14493 270 aaKnown RBP eCLIP13.18□□□□□ -0.3
VAPB-202ENST00000395802 SHBQ15464 509 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 SLC5A12Q1EHB4 618 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 SMU1Q2TAY7 513 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 CATSPEREQ5SY80 951 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 FAM91A1Q658Y4 838 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 TMIGD1Q6UXZ0 262 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ADCK2Q7Z695 626 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 LAS2Q8IYD9 372 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 OR4K1Q8NGD4 311 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 OR4C6Q8NH72 309 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 OR10G6Q8NH81 332 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ZUFSPQ96AP4 578 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 PPP1R36Q96LQ0 422 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 ACTR5Q9H9F9 607 aaPredicted RBP13.18□□□□□ -0.3
VAPB-202ENST00000395802 ACTR10Q9NZ32 417 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 LRIT1Q9P2V4 623 aa13.18□□□□□ -0.3
VAPB-202ENST00000395802 PCM1Q15154 2024 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 KCNE1BA0A087WTH5 132 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 FOXE1O00358 373 aaPredicted RBP13.17□□□□□ -0.3
VAPB-202ENST00000395802 BTN3A3O00478 584 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 FCHO1O14526 889 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 PPM1DO15297 605 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 RETP07949 1114 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 PNLIPP16233 465 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 LBPP18428 481 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 PIK3CBP42338 1070 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 GPLD1P80108 840 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 ABRAXAS2Q15018 415 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 LSM12Q3MHD2 195 aaKnown RBP13.17□□□□□ -0.3
VAPB-202ENST00000395802 XKR7Q5GH72 579 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 FAM181AQ8N9Y4 354 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 WDR20Q8TBZ3 569 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 AHCYL2Q96HN2 611 aaKnown RBP13.17□□□□□ -0.3
VAPB-202ENST00000395802 TWSG1Q9GZX9 223 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 TUBB1Q9H4B7 451 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 WDR55Q9H6Y2 383 aaPredicted RBP13.17□□□□□ -0.3
VAPB-202ENST00000395802 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 BTRCQ9Y297 605 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 R4GN57 208 aa13.17□□□□□ -0.3
VAPB-202ENST00000395802 TP53BP1Q12888 1972 aaPredicted RBP13.17□□□□□ -0.3
VAPB-202ENST00000395802 ANKDD1BA6NHY2 528 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 H7BY64 318 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 UBDO15205 165 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 SLC22A2O15244 555 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 MAP3K7O43318 606 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 RSL1D1O76021 490 aaKnown RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 UNC5CO95185 931 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 JUNP05412 331 aaKnown RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 POLR2CP19387 275 aaPredicted RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 VARSP26640 1264 aaKnown RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 ADSLP30566 484 aaPredicted RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 PPM1FP49593 454 aaPredicted RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 NR0B2Q15466 257 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 OGFOD2Q6N063 350 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 SPESP1Q6UW49 350 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
VAPB-202ENST00000395802 SPATA19Q7Z5L4 167 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 KYQ8NBH2 561 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 OR7G3Q8NG95 312 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PRAP1Q96NZ9 151 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 CENPKQ9BS16 269 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 GTPBP2Q9BX10 602 aaKnown RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 RAB33BQ9H082 229 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 AKTIPQ9H8T0 292 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 SPHK1Q9NYA1 384 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 TMED5Q9Y3A6 229 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PCDHGB2Q9Y5G2 931 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PATE3B3GLJ2 98 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 E9PBE3 544 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 KLHL41O60662 606 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PDYNP01213 254 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PROS1P07225 676 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 T-ENOLP0DO92 83 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PCNAP12004 261 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 UGT2B7P16662 529 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 ENGP17813 658 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 CD22P20273 847 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PRPH2P23942 346 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PSMB5P28074 263 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 CAPZBP47756 277 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 STX1BP61266 288 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 NCALDP61601 193 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 RELAQ04206 551 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 ACTN3Q08043 901 aaPredicted RBP13.16□□□□□ -0.3
VAPB-202ENST00000395802 RBBP5Q15291 538 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms