RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 HNRNPRO43390 633 aaKnown RBP15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 GRK3P35626 688 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 P2RY2P41231 377 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 GALK1P51570 392 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 PRAMEF13Q5VWM6 474 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 ZFAND4Q86XD8 727 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 CLVS1Q8IUQ0 354 aaPredicted RBP15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 XAGE5Q8WWM1 108 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TRIM39Q9HCM9 518 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 SDC1P18827 310 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 CDKN2CP42773 168 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 AP1S2P56377 157 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 RCAN2Q14206 197 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 FAM86B1Q8N7N1 296 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 OR7G3Q8NG95 312 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 RAB8BQ92930 207 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TMEM125Q96AQ2 219 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 SAMD11Q96NU1 681 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 PLA2G2FQ9BZM2 168 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 SAMHD1Q9Y3Z3 626 aaKnown RBP15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TESMINQ9Y4I5 508 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 CACNA1CQ13936 2221 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TNFAIP8O95379 198 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 HPCAL1P37235 193 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 PHEXP78562 749 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 FGD3Q5JSP0 725 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 LRRTM4Q86VH4 590 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 PDPRQ8NCN5 879 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 ISG20Q96AZ6 181 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 CXorf40BQ96DE9 158 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 MYADMQ96S97 322 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 SMAD5Q99717 465 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 UGT2B28Q9BY64 529 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 LTB4R2Q9NPC1 389 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 UTS2RQ9UKP6 389 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 TMCO1Q9UM00 188 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 NCKAP1Q9Y2A7 1128 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 MYRFQ9Y2G1 1151 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 CACNB4O00305 520 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 QSOX1O00391 747 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC22A2O15244 555 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 IL6P05231 212 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 PIGFQ07326 219 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 DLX2Q07687 328 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 TICAM1Q8IUC6 712 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 CBARPQ8N350 705 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 TMBIM1Q969X1 311 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 DTD2Q96FN9 168 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 C17orf62Q9BQA9 187 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 IKZF5Q9H5V7 419 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 RETREG1Q9H6L5 497 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 YY1AP1Q9H869 796 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 MBNL1Q9NR56 388 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 ACTR3BQ9P1U1 418 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 RHCGQ9UBD6 479 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 STOML2Q9UJZ1 356 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 G3V2T6 193 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 MMP12P39900 470 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 HNMTP50135 292 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 MAPK12P53778 367 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 USP39Q53GS9 565 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 PLEKHS1Q5SXH7 462 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 TMIGD1Q6UXZ0 262 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 PRR23CQ6ZRP0 262 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 GALNT7Q86SF2 657 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 BBS4Q96RK4 519 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 PRSS16Q9NQE7 514 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 TMEM181Q9P2C4 612 aa15.37■□□□□ 0.05
SMARCD1-202ENST00000394963 COL4A6Q14031 1691 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 TMEM247A6NEH6 219 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 ZNF860A6NHJ4 632 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 RPS3P23396 243 aaKnown RBP eCLIP15.36■□□□□ 0.053e-6■■■□□ 16.9
SMARCD1-202ENST00000394963 GANABQ14697 944 aaKnown RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 ANKRD34AQ69YU3 496 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 LRRC70Q7Z2Q7 622 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 EID3Q8N140 333 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 CLIP3Q96DZ5 547 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 ANKRD27Q96NW4 1050 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 TPSD1Q9BZJ3 242 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 PRDM8Q9NQV8 689 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC13A4Q9UKG4 626 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 CDH7Q9ULB5 785 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 ACOT8O14734 319 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 C6orf47O95873 294 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 C9orf64Q5T6V5 341 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 PARGQ86W56 976 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 TCAIMQ8N3R3 496 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 OR9A1PQ8NGU1 263 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 CIDECQ96AQ7 238 aaPredicted RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 CENPNQ96H22 339 aaPredicted RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 REXO5Q96IC2 774 aaKnown RBP15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 ADI1Q9BV57 179 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC23A2Q9UGH3 650 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 SCN3AQ9NY46 2000 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 B4GAT1O43505 415 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 C1QCP02747 245 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 C9P02748 559 aa15.36■□□□□ 0.05
SMARCD1-202ENST00000394963 NUDT7P0C024 238 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms