RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MYBL2P10244 700 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 ETS1P14921 441 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 ZNF33BQ06732 778 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 LRRC8BQ6P9F7 803 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 NEK10Q6ZWH5 1172 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 LRRC6Q86X45 466 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 PANX2Q96RD6 677 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 TGIF2Q9GZN2 237 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 ITGB1BP2Q9UKP3 347 aa20.04■□□□□ 0.8
TRAF4-203ENST00000394925 A0A0A6YYC8 382 aaPredicted RBP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 I3L1I5 382 aaPredicted RBP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 LIASO43766 372 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 WISP2O76076 250 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 APRTP07741 180 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 ICAM2P13598 275 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 PTMSP20962 102 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 RPS3P23396 243 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 RPA3P35244 121 aaPredicted RBP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 EFNA3P52797 238 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 CASP6P55212 293 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 SESN2P58004 480 aaPredicted RBP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 AP2B1P63010 937 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 CRADDP78560 199 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 OASLQ15646 514 aaKnown RBP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 PCID2Q5JVF3 399 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 CTSL3PQ5NE16 218 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 TMEM205Q6UW68 189 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 RAD9BQ6WBX8 426 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 PAQR7Q86WK9 346 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 ZC3H7AQ8IWR0 971 aaKnown RBP20.03■□□□□ 0.8
TRAF4-203ENST00000394925 OTUD6BQ8N6M0 293 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 OR9A1PQ8NGU1 263 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 SMPDL3AQ92484 453 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 FAM136AQ96C01 138 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 IMMP1LQ96LU5 166 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 ZNF148Q9UQR1 794 aa20.03■□□□□ 0.8
TRAF4-203ENST00000394925 IGKV1-8A0A0C4DH67 115 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 A8MUI8 341 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 FOXS1O43638 330 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 SLC19A2O60779 497 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 PHF2O75151 1096 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 MATN4O95460 622 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 FMO4P31512 558 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 MAT1AQ00266 395 aaKnown RBP20.02■□□□□ 0.8
TRAF4-203ENST00000394925 LONRF1Q17RB8 773 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 ANKRD20A4Q4UJ75 823 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.02■□□□□ 0.8
TRAF4-203ENST00000394925 GARNL3Q5VVW2 1013 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 XKRXQ6PP77 449 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 KIAA1328Q86T90 577 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 SYCE1Q8N0S2 351 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 MPP5Q8N3R9 675 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 RERGQ96A58 199 aaPredicted RBP20.02■□□□□ 0.8
TRAF4-203ENST00000394925 OR2A5Q96R48 311 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 TUBB6Q9BUF5 446 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 TRIM8Q9BZR9 551 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 DRC3Q9H069 523 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 TREX1Q9NSU2 369 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 TEKT2Q9UIF3 430 aa20.02■□□□□ 0.8
TRAF4-203ENST00000394925 NCOA6Q14686 2063 aaPredicted RBP20.01■□□□□ 0.79
TRAF4-203ENST00000394925 CACNA1CQ13936 2221 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 ARHGEF33A8MVX0 844 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 NIPSNAP2O75323 286 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 C8orf89P0DMQ9 161 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 ERGP11308 486 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 ESRRAP11474 423 aaPredicted RBP20.01■□□□□ 0.79
TRAF4-203ENST00000394925 NMBRP28336 390 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 ADORA2A-AS1P86434 159 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 C3AR1Q16581 482 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 ZNF766Q5HY98 468 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 ARHGEF39Q8N4T4 335 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 BIRC8Q96P09 236 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 TAC3Q9UHF0 121 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 TINAGQ9UJW2 476 aa20.01■□□□□ 0.79
TRAF4-203ENST00000394925 IGHV3-20A0A0C4DH32 117 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 SEC24DO94855 1032 aaPredicted RBP20■□□□□ 0.79
TRAF4-203ENST00000394925 PKMP14618 531 aaKnown RBP20■□□□□ 0.79
TRAF4-203ENST00000394925 SNX1Q13596 522 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 ICE2Q659A1 982 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 ZNF425Q6IV72 752 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 ZNF295-AS1Q8N0V1 137 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 C1orf54Q8WWF1 131 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 METTL21AQ8WXB1 218 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 ABCF3Q9NUQ8 709 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 UTP6Q9NYH9 597 aaKnown RBP20■□□□□ 0.79
TRAF4-203ENST00000394925 PCYOX1Q9UHG3 505 aa20■□□□□ 0.79
TRAF4-203ENST00000394925 FAM227AF5H4B4 570 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 P2RX6O15547 441 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 ZSCAN5DPP0CG00 497 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 SMSP52788 366 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 PRDX1Q06830 199 aaKnown RBP19.99■□□□□ 0.79
TRAF4-203ENST00000394925 GBX1Q14549 363 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 SKOR2Q2VWA4 1001 aaPredicted RBP19.99■□□□□ 0.79
TRAF4-203ENST00000394925 MFSD4BQ5TF39 518 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 FCRLBQ6BAA4 426 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 LANCL3Q6ZV70 420 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 ADCK2Q7Z695 626 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 PLD3Q8IV08 490 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 CCDC89Q8N998 374 aa19.99■□□□□ 0.79
TRAF4-203ENST00000394925 PPFIBP2Q8ND30 876 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms