RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 SVOPLQ8N434 492 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 ASB11Q8WXH4 323 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 ZSWIM3Q96MP5 696 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 AASDHPPTQ9NRN7 309 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 TDP1Q9NUW8 608 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 TBC1D23Q9NUY8 699 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 WNT6Q9Y6F9 365 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 SZT2Q5T011 3432 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 MYO9BQ13459 2157 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 E7EQ34 232 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 FPGTO14772 594 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ERN1O75460 977 aaKnown RBP13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 CLPXO76031 633 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 KCNK5O95279 499 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 GBAP04062 536 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 HOXA9P31269 272 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 BMPR1AP36894 532 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 MAPK8P45983 427 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PREPP48147 710 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 RAD23AP54725 363 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PFN3P60673 137 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 VBP1P61758 197 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 MOGQ16653 247 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 CYP2A13Q16696 494 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TPRG1Q6ZUI0 275 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 CROCCP3Q8IVE0 287 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SH3KBP1Q96B97 665 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PANX1Q96RD7 426 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 BRD9Q9H8M2 597 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PRM3Q9NNZ6 103 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ASIC5Q9NY37 505 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 MAN2B2Q9Y2E5 1009 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ALPK3Q96L96 1907 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 CEP290O15078 2479 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 CLIC1O00299 241 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SGTAO43765 313 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SCN2BO60939 215 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 FADS2O95864 444 aaKnown RBP13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 NTRK1P04629 796 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TYRP14679 529 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 MYOGP15173 224 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PTPN2P17706 415 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SLC6A12P48065 614 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 CSNK1DP48730 415 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ADPRMQ3LIE5 342 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TTLL9Q3SXZ7 439 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 GPR33Q49SQ1 333 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PERM1Q5SV97 790 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 HSD11B1LQ7Z5J1 315 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ZZZ3Q8IYH5 903 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 AADATQ8N5Z0 425 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF366Q8N895 744 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SPPL3Q8TCT6 385 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TPD52L3Q96J77 140 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 RAD9AQ99638 391 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SLC12A9Q9BXP2 914 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SLC29A3Q9BZD2 475 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SUV39H2Q9H5I1 410 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 PDP1Q9P0J1 537 aaPredicted RBP13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM9Q9P0T7 183 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 SLC25A13Q9UJS0 675 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 C3orf18Q9UK00 162 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 HS3ST2Q9Y278 367 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
GTF2F1-201ENST00000394456 GRM6O15303 877 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SYN1P17600 705 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.328e-7■■□□□ 12.6
GTF2F1-201ENST00000394456 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 FRG2Q64ET8 278 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 Q6ZVL8 140 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 GRASPQ7Z6J2 395 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SYT12Q8IV01 421 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ST13P5Q8NFI4 369 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ZFP90Q8TF47 636 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 RAB2BQ8WUD1 216 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 IRF7Q92985 503 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 REXO5Q96IC2 774 aaKnown RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 FRG2BQ96QU4 278 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 AMBNQ9NP70 447 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ENPP5Q9UJA9 477 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PCDHGA10Q9Y5H3 936 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 DNAH14Q0VDD8 3507 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 WNT9AO14904 365 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 NDUFS2O75306 463 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 MT-ND2P03891 347 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms