RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PTGER1P34995 402 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PTGFRP43088 359 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ALDH7A1P49419 539 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 BLKP51451 505 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 DMP1Q13316 513 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 CDR2LQ86X02 465 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 D2HGDHQ8N465 521 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LILRA3Q8N6C8 439 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 GPRC5AQ8NFJ5 357 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TCP11Q8WWU5 503 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LENG1Q96BZ8 264 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 FBXL8Q96CD0 374 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 C14orf79Q96F83 325 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TTYH2Q9BSA4 534 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 DPH7Q9BTV6 452 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TEKT3Q9BXF9 490 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 NXF5Q9H1B4 397 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 TXLNGQ9NUQ3 528 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RHCGQ9UBD6 479 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RAPGEFL1Q9UHV5 662 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PLEKHA6Q9Y2H5 1048 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 U3KQE9 123 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 RRP8O43159 456 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 NCK1P16333 377 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 FBLP22087 321 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 CCNOP22674 350 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 SLC6A6P31641 620 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 GKP32189 559 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ORC2Q13416 577 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 TUBA3CQ13748 450 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 UAP1Q16222 522 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 FAM187BQ17R55 369 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 LACTB2Q53H82 288 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 XKR3Q5GH77 459 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 TMEM225Q6GV28 225 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 C1orf229Q6ZS94 237 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 MEPCEQ7L2J0 689 aaKnown RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 TMEM151BQ8IW70 566 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 MICU2Q8IYU8 434 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 CADM3Q8N126 398 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 C7orf57Q8NEG2 295 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 OR5M8Q8NGP6 311 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ERMNQ8TAM6 284 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 HAS2Q92819 552 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 REPS1Q96D71 796 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 ZNF512Q96ME7 567 aaPredicted RBP3.43□□□□□ -1.86
XRN1-202ENST00000392981 PANK3Q9H999 370 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 PIGVQ9NUD9 493 aa3.43□□□□□ -1.86
XRN1-202ENST00000392981 KDRP35968 1356 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ZNF536O15090 1300 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ARPC3O15145 178 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 OR10H2O60403 315 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 RHBDL1O75783 438 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 SERPIND1P05546 499 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 PCMT1P22061 227 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 CASP14P31944 242 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 GJC1P36383 396 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ANXA11P50995 505 aaKnown RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 PLCD1P51178 756 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 SIRPAP78324 504 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 FAM153CQ494X1 144 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 CFAP77Q6ZQR2 320 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 DCDC5Q6ZRR9 648 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ASPGQ86U10 573 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 TMEM123Q8N131 208 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 CRYBG2Q8N1P7 616 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 TRPV3Q8NET8 790 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 KCNG3Q8TAE7 436 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 RABGGTAQ92696 567 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 TSACCQ96A04 125 aaPredicted RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 LGALS12Q96DT0 336 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ELMO2Q96JJ3 720 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 CIPCQ9C0C6 399 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 NKIRAS1Q9NYS0 192 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 EBF1Q9UH73 591 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 NARFQ9UHQ1 456 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 MRTO4Q9UKD2 239 aaKnown RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 SATB2Q9UPW6 733 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 RAXQ9Y2V3 346 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 SZT2Q5T011 3432 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 SCAPERQ9BY12 1400 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 A0A1B0GTQ1 180 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 A0A1B0GTW7 788 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 C9orf172C9J069 976 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 PRR23D1E9PI22 279 aaPredicted RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 F8W810 466 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 F8WDY8 70 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 HOXA3O43365 443 aaPredicted RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 BMP10O95393 424 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 KRT6BP04259 564 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 C8AP07357 584 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ANXA4P09525 319 aaPredicted RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 PRR23D2P0DMB1 279 aaPredicted RBP3.42□□□□□ -1.86
XRN1-202ENST00000392981 SLC2A3P11169 496 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ST6GAL1P15907 406 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 ACADSP16219 412 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 PPP3CBP16298 524 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 RFX3P48380 749 aa3.42□□□□□ -1.86
XRN1-202ENST00000392981 KRT6CP48668 564 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms