RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ETFAP13804 333 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 CDKN2CP42773 168 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 DCST2Q5T1A1 773 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 C6orf120Q7Z4R8 191 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 OR51V1Q9H2C8 321 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 CLCA3PQ9Y6N3 262 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 NPPAP01160 153 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 SLC3A1Q07837 685 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 GTF2H2Q13888 395 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 GTF2H2CQ6P1K8 395 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TSEN2Q8NCE0 465 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 NIFKQ9BYG3 293 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 BLOC1S4Q9NUP1 217 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 FTCDNL1E5RQL4 147 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 PEX12O00623 359 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TBX1O43435 398 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 HTR1AP08908 422 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.111e-12■■■■■ 37.3
CCDC50-201ENST00000392455 HECTD2Q5U5R9 776 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 SLC26A9Q7LBE3 791 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 PIGZQ86VD9 579 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 C2orf73Q8N5S3 287 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 LRRC57Q8N9N7 239 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 RNF128Q8TEB7 428 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 PAPSS1O43252 624 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 FADDQ13158 208 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TBRG1Q3YBR2 411 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF529Q6P280 563 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 NXPE1Q8N323 547 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 MSI2Q96DH6 328 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 CIB1Q99828 191 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 SSU72Q9NP77 194 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 PTBP2Q9UKA9 531 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 U3KQV3 271 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TVP23AA6NH52 213 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 DLGAP1O14490 977 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 WDR53Q7Z5U6 358 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF584Q8IVC4 421 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TWNKQ96RR1 684 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 LGMNQ99538 433 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 OR6C75A6NL08 312 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF181Q2M3W8 571 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF420Q8TAQ5 688 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ADAD1Q96M93 576 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 URM1Q9BTM9 101 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 LRRC3Q9BY71 257 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ALKBH4Q9NXW9 302 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TRAPPC13A5PLN9 417 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 RAB5CP51148 216 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CLCN2P51788 898 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 OR12D2P58182 307 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 POU4F2Q12837 409 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 AMIGO2Q86SJ2 522 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SYNPOQ8N3V7 929 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SYT3Q9BQG1 590 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NPLQ9BXD5 320 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SAV1Q9H4B6 383 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PTGES2Q9H7Z7 377 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PRKAB1Q9Y478 270 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 OAZ2O95190 189 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CPN2P22792 545 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 THBS2P35442 1172 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SP3Q02447 781 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PPP1R26Q5T8A7 1209 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 VSTM1Q6UX27 236 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 IQCF1Q8N6M8 205 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SPIN2AQ99865 258 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SPIN2BQ9BPZ2 258 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 LDAHQ9H6V9 325 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 BIN3Q9NQY0 253 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PIAS1O75925 651 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PCCBP05166 539 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 EDNRAP25101 427 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 FKBP1AP62942 108 aaKnown RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PTCHD3Q3KNS1 767 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 GLT8D1Q68CQ7 371 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 POMZP3Q6PJE2 187 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 MON1AQ86VX9 555 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 TWIST2Q8WVJ9 160 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 PPM1MQ96MI6 270 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 DNTTIP1Q9H147 329 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 TMEM45AQ9NWC5 275 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 LRFN1Q9P244 771 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 ASTN1O14525 1302 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NCANO14594 1321 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 LOC100509620A0A075B734 347 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 DPPA5A6NC42 116 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NAE1Q13564 534 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 GFOD2Q3B7J2 385 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 GLIS3Q8NEA6 775 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SLC41A3Q96GZ6 507 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 XPNPEP2O43895 674 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NPHS1O60500 1241 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 AZGP1P25311 298 aaKnown RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NSG1P42857 185 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF41P51814 821 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CRYBB1P53674 252 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms