RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ANXA5P08758 320 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ALAS2P22557 587 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 GRK3P35626 688 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 HNMTP50135 292 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 RRADP55042 308 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ATP6V0D1P61421 351 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 YBX1P67809 324 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 IL10RAQ13651 578 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 PPP1R3AQ16821 1122 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 MLIPQ5VWP3 458 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 MRPL14Q6P1L8 145 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 FBXO42Q6P3S6 717 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 TMEM207Q6UWW9 146 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 MBOAT1Q6ZNC8 495 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 FRA10AC1Q70Z53 315 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 CCDC91Q7Z6B0 441 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 CSNK1A1LQ8N752 337 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 NOA1Q8NC60 698 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 OR2Y1Q8NGV0 311 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 OR56A3Q8NH54 315 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 FBF1Q8TES7 1133 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 NACC2Q96BF6 587 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 OR2A5Q96R48 311 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ATG10Q9H0Y0 220 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 SLC25A18Q9H1K4 315 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 SLC26A1Q9H2B4 701 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 CTNNAL1Q9UBT7 734 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 MTO1Q9Y2Z2 717 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 OARD1Q9Y530 152 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 LOC105369274A0A096LPK9 316 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 LOC102723532A0A0G2JNH3 316 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 NPEPPSL1A6NEC2 478 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 HAT1O14929 419 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 NRP2O60462 931 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 KLF7O75840 302 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-203ENST00000391855 EIF2S1P05198 315 aaKnown RBP12.1□□□□□ -0.47
GGPS1-203ENST00000391855 FURINP09958 794 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 RAB10P61026 200 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 ZNF460Q14592 562 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 SSPNQ14714 243 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 NDUFA9Q16795 377 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 CEP97Q8IW35 865 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 OR4N4Q8N0Y3 316 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 TCAIMQ8N3R3 496 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 TBC1D19Q8N5T2 526 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 C9orf43Q8TAL5 461 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-203ENST00000391855 VPS50Q96JG6 964 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 CABS1Q96KC9 395 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 CYTH2Q99418 400 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 FMO2Q99518 471 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 EGFL8Q99944 293 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 SEMA4CQ9C0C4 833 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 STARD5Q9NSY2 213 aa12.1□□□□□ -0.47
GGPS1-203ENST00000391855 CUEDC1Q9NWM3 386 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-203ENST00000391855 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
GGPS1-203ENST00000391855 PTRH2Q9Y3E5 179 aaKnown RBP12.1□□□□□ -0.47
GGPS1-203ENST00000391855 NBEAQ8NFP9 2946 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 KCNE1BA0A087WTH5 132 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 H7BY64 318 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 CDC7O00311 574 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 IPO13O94829 963 aaKnown RBP12.09□□□□□ -0.47
GGPS1-203ENST00000391855 PRB1P04280 392 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 ITGAXP20702 1163 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 SLC26A3P40879 764 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 PGGT1BP53609 377 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 CSNK1G2P78368 415 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 FAM53BQ14153 422 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 MED25Q71SY5 747 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 OVCH1Q7RTY7 1134 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 TMEM102Q8N9M5 508 aaPredicted RBP12.09□□□□□ -0.47
GGPS1-203ENST00000391855 ABHD11Q8NFV4 315 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 ANKRD49Q8WVL7 239 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 ALKBH8Q96BT7 664 aaKnown RBP12.09□□□□□ -0.47
GGPS1-203ENST00000391855 PTERQ96BW5 349 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 C10orf90Q96M02 699 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 PRAP1Q96NZ9 151 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 SARGQ9BW04 601 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 FUT8Q9BYC5 575 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 ZNF304Q9HCX3 659 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 ACSS2Q9NR19 701 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 G3BP2Q9UN86 482 aaKnown RBP12.09□□□□□ -0.47
GGPS1-203ENST00000391855 DYRK1BQ9Y463 629 aa12.09□□□□□ -0.47
GGPS1-203ENST00000391855 FER1L5A0AVI2 2057 aa12.08□□□□□ -0.47
GGPS1-203ENST00000391855 MGAQ8IWI9 3026 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 SEC16AO15027 2179 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 CCDC189A1A4V9 331 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 B8ZZF3 427 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 PEX12O00623 359 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 PHGDHO43175 533 aaKnown RBP12.08□□□□□ -0.48
GGPS1-203ENST00000391855 KLHL41O60662 606 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 PIAS1O75925 651 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms