RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NUP54Q7Z3B4 507 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ATG9AQ7Z3C6 839 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF144BQ7Z419 303 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 R3HCC1LQ7Z5L2 792 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF554Q86TJ5 538 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RPAINQ86UA6 219 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TTC30AQ86WT1 665 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 VPS37DQ86XT2 251 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PTOV1Q86YD1 416 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 LURAP1LQ8IV03 231 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DENND1CQ8IV53 801 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ARHGAP12Q8IWW6 846 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RCOR2Q8IZ40 523 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3Q8IZP1 549 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 VPS52Q8N1B4 723 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 BATF2Q8N1L9 274 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OSR2Q8N2R0 312 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC25A45Q8N413 288 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 NME8Q8N427 588 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GBGT1Q8N5D6 347 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM71E2Q8N5Q1 922 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MIR7-3HGQ8N6C7 128 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 KIR3DL3Q8N743 410 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM99Q8N816 258 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZFP41Q8N8Y5 198 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 L3MBTL4Q8NA19 623 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GATSQ8NAP1 163 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PRPF38AQ8NAV1 312 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CNNM3Q8NE01 707 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DUSP18Q8NEJ0 188 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GJC3Q8NFK1 279 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IL17REQ8NFR9 667 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TNIP2Q8NFZ5 429 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OR51G1Q8NGK1 321 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OR13C3Q8NGS6 347 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF671Q8TAW3 534 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 HMGCLL1Q8TB92 370 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SYNPRQ8TBG9 265 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR119Q8TDV5 335 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PDCD6IPQ8WUM4 868 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM170AQ8WVE7 144 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RUFY2Q8WXA3 655 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SMPDL3BQ92485 455 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RGP1Q92546 391 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RDH5Q92781 318 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 HPS3Q969F9 1004 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MYDGFQ969H8 173 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MARC2Q969Z3 335 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TRIM43Q96BQ3 446 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXL8Q96CD0 374 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ORAI1Q96D31 301 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RBM18Q96H35 190 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZC3HAV1LQ96H79 300 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 VSIG2Q96IQ7 327 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 METTL2AQ96IZ6 378 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CDK5RAP3Q96JB5 506 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF514Q96K75 400 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CLUHP3Q96NS8 147 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MUS81Q96NY9 551 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CASD1Q96PB1 797 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OR5M11Q96RB7 305 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MYADMQ96S97 322 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PLEKHF1Q96S99 279 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DDOQ99489 341 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IL12RB2Q99665 862 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SULT4A1Q9BR01 284 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 NAA38Q9BRA0 125 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 BUD13Q9BRD0 619 aaKnown RBP eCLIP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF251Q9BRH9 671 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SRSF8Q9BRL6 282 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PELOQ9BRX2 385 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SHANK2-AS3Q9BTD1 123 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 KIFC3Q9BVG8 833 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MRPL32Q9BYC8 188 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TRIM31Q9BZY9 425 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC113Q9H0I3 377 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM49AQ9H0Q0 323 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 THAP2Q9H0W7 228 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 NDST4Q9H3R1 872 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 EHD1Q9H4M9 534 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CXorf56Q9H5V9 222 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PPP1R3EQ9H7J1 279 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CCSER2Q9H7U1 834 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF702PQ9H963 129 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 EML4Q9HC35 981 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PRDM11Q9NQV5 511 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MMP26Q9NRE1 261 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SMYD2Q9NRG4 433 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 C1orf112Q9NSG2 853 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PRMT7Q9NVM4 692 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DDX18Q9NVP1 670 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 C14orf119Q9NWQ9 140 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM206AQ9NX38 181 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DPP3Q9NY33 737 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TMOD4Q9NZQ9 345 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 KIAA1456Q9P272 454 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FRMD4AQ9P2Q2 1039 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 UVRAGQ9P2Y5 699 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CRNNQ9UBG3 495 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 C19orf25Q9UFG5 118 aaPredicted RBP-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms