RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 VPS33AQ96AX1 596 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 EFCAB1Q9HAE3 211 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 GPR27Q9NS67 375 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 TRNAU1APQ9NX07 287 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SPATA7Q9P0W8 599 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 A0A088AWK7 358 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 A6NCN8 305 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 TOR1BO14657 336 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 PDE5AO76074 875 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 PKLRP30613 574 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ART3Q13508 389 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 E2F2Q14209 437 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 MAPRE2Q15555 327 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 PDCD4Q53EL6 469 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 CWF19L1Q69YN2 538 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 MED27Q6P2C8 311 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 C17orf64Q86WR6 236 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ZFAND4Q86XD8 727 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ULK2Q8IYT8 1036 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 OR4E2Q8NGC2 313 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 APOLD1Q96LR9 279 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 MAGEB10Q96LZ2 347 aaPredicted RBP11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC25A23Q9BV35 468 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 RNPEPL1Q9HAU8 725 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 MRGBPQ9NV56 204 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SPHK1Q9NYA1 384 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 PCDHGA11Q9Y5H2 935 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 NUP214P35658 2090 aaPredicted RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 H7BY64 318 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 ANKRD28O15084 1053 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 NRP2O60462 931 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 KRT36O76013 467 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 BCKDHAP12694 445 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 F3P13726 295 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 NUDT1P36639 197 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 HSD17B2P37059 387 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 DPP6P42658 865 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 RPS13P62277 151 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 STX5Q13190 355 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 PRRT3Q5FWE3 981 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 BLOC1S3Q6QNY0 202 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 WASH2PQ6VEQ5 465 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SCUBE1Q8IWY4 988 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 KRTCAP2Q8N6L1 136 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 GPBAR1Q8TDU6 330 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 CXorf40BQ96DE9 158 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 PRAP1Q96NZ9 151 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC39A3Q9BRY0 314 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 HAUS8Q9BT25 410 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 EFCAB11Q9BUY7 163 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 EBPLQ9BY08 206 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 IL1RL2Q9HB29 575 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC52A3Q9NQ40 469 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 WASH6PQ9NQA3 447 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 DLGAP2Q9P1A6 1054 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 TAAR2Q9P1P5 351 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 PCOLCE2Q9UKZ9 415 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 EIF3LQ9Y262 564 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 COLEC10Q9Y6Z7 277 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 CABIN1Q9Y6J0 2220 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 MDC1Q14676 2089 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 A0A1W2PR77 199 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 FEZF1A0PJY2 475 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 ASPDHA6ND91 283 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 MRASO14807 208 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 CTSEP14091 401 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 AMD1P17707 334 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 TACR1P25103 407 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 CD38P28907 300 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 PEBP1P30086 187 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 RPS6KA3P51812 740 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 POLR2JP52435 117 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SESN3P58005 492 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 ROR2Q01974 943 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 USP39Q53GS9 565 aaKnown RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 TAF8Q7Z7C8 310 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 PARGQ86W56 976 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 FAM129CQ86XR2 697 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 PLD3Q8IV08 490 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 RAB42Q8N4Z0 105 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 CADM4Q8NFZ8 388 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 OR2A1Q8NGT9 310 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 OR2L8Q8NGY9 312 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 CMTM7Q96FZ5 175 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SPACA7Q96KW9 195 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 WDR41Q9HAD4 459 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SPATA6Q9NWH7 488 aaPredicted RBP11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 VPS29Q9UBQ0 182 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC7A8Q9UHI5 535 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 HEBP2Q9Y5Z4 205 aa11.74□□□□□ -0.53
SPTBN1-203ENST00000389980 ZNF839A8K0R7 811 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 SAP18O00422 153 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 TGFB1P01137 390 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 JUNDP17535 347 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 DGKQP52824 942 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 KCNK10P57789 538 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 CSTF3Q12996 717 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms