RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TRA2AQ13595 282 aaKnown RBP eCLIP0.33□□□□□ -2.362e-56■■■■□ 20.9
SNORD28-201ENST00000384706 CYLC2Q14093 348 aaPredicted RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TRIM29Q14134 588 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 CA9Q16790 459 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 UPP1Q16831 310 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 GSG1Q2KHT4 349 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 GRAMD1BQ3KR37 738 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 UGT3A2Q3SY77 523 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF658BQ4V348 819 aaPredicted RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TFDP3Q5H9I0 405 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF506Q5JVG8 444 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 C9orf129Q5T035 196 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 GPR157Q5UAW9 335 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF776Q68DI1 518 aaPredicted RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 KIAA0930Q6ICG6 404 aaPredicted RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 JADE1Q6IE81 842 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ACAD10Q6JQN1 1059 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF544Q6NX49 715 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IRGCQ6NXR0 463 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TMCO3Q6UWJ1 677 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 CFAP77Q6ZQR2 320 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TMPRSS11BQ86T26 416 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 NAXDQ8IW45 347 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 DIS3L2Q8IYB7 885 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 NKAPQ8N5F7 415 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 FAM89BQ8N5H3 189 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SAMD3Q8N6K7 520 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 THAP8Q8NA92 274 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TDRD5Q8NAT2 981 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PCYOX1LQ8NBM8 494 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PAPD5Q8NDF8 572 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 OR2L5Q8NG80 312 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 OR6T1Q8NGN1 323 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 RPLP0P6Q8NHW5 317 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 AFAP1L1Q8TED9 768 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SSMEM1Q8WWF3 244 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 METTL21AQ8WXB1 218 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PIGBQ92521 554 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZUFSPQ96AP4 578 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 DHX58Q96C10 678 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 STARD4Q96DR4 205 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SGF29Q96ES7 293 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 RRP36Q96EU6 259 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SIPA1Q96FS4 1042 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PPP1R16AQ96I34 528 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MAGEB18Q96M61 343 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 FAM20AQ96MK3 541 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 CMTM3Q96MX0 182 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SRSF8Q9BRL6 282 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ISCA1Q9BUE6 129 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 HES7Q9BYE0 225 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PANK2Q9BZ23 570 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MTMR12Q9C0I1 747 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 STRADBQ9C0K7 418 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PPIL3Q9H2H8 161 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SH2D4AQ9H788 454 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TLE6Q9H808 572 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MARCH7Q9H992 704 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TBC1D17Q9HA65 648 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IL1RAPQ9NPH3 570 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 GKN1Q9NS71 199 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 VNN3Q9NY84 501 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 HACD3Q9P035 362 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ARMCX1Q9P291 453 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 LARSQ9P2J5 1176 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 HACL1Q9UJ83 578 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PRDM4Q9UKN5 801 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF346Q9UL40 294 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 PLEKHA6Q9Y2H5 1048 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MRPS18CQ9Y3D5 142 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 GRIP1Q9Y3R0 1128 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 TRIM17Q9Y577 477 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MYH14Q7Z406 1995 aaKnown RBP0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IGSF1Q8N6C5 1336 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 SALL1Q9NSC2 1324 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 MYO10Q9HD67 2058 aa0.33□□□□□ -2.36
SNORD28-201ENST00000384706 IGLV3-16A0A075B6K0 115 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 TRAV9-2A0A087WT02 112 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 TRBV5-5A0A0J9YX44 114 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 SPRR5A0A1B0GTR4 108 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 PINLYPA6NC86 204 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 RRN3P2A6NIE6 340 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 LRRC72A6NJI9 287 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 MYO1GB0I1T2 1018 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 F8VVB4 439 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 F8VWA3 439 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 PANO1I0J062 215 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 K7EQG2 157 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 RTCAO00442 366 aaKnown RBP0.32□□□□□ -2.36
SNORD28-201ENST00000384706 PIP5K1CO60331 668 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 OR10H2O60403 315 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 PRAMEF11O60813 436 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 MTRF1O75570 445 aaKnown RBP0.32□□□□□ -2.36
SNORD28-201ENST00000384706 ERAL1O75616 437 aaKnown RBP0.32□□□□□ -2.36
SNORD28-201ENST00000384706 CREG1O75629 220 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 RHBDL1O75783 438 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 KRT33AO76009 404 aa0.32□□□□□ -2.36
SNORD28-201ENST00000384706 BAIAP3O94812 1187 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms