RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 NKD1Q969G9 470 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 SLC39A3Q9BRY0 314 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 ZNF358Q9NW07 568 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 MED31Q9Y3C7 131 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 ZFP37Q9Y6Q3 630 aaPredicted RBP13.63□□□□□ -0.23
SNPH-201ENST00000381867 PRPS1L1P21108 318 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 ALAS2P22557 587 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 ACVR2AP27037 513 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 GRK6P43250 576 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 XKRXQ6PP77 449 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 XKR5Q6UX68 686 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 OSER1Q9NX31 292 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 RDH8Q9NYR8 311 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 PCDHGB1Q9Y5G3 927 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 MYH7P12883 1935 aa13.63□□□□□ -0.23
SNPH-201ENST00000381867 ILVBLA1L0T0 632 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 OR2AG2A6NM03 316 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 GSK3BP49841 420 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 TLR1Q15399 786 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 KIAA1161Q6NSJ0 714 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 EPGNQ6UW88 154 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 C6orf89Q6UWU4 347 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 ADGRG6Q86SQ4 1221 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 ADAMTS10Q9H324 1103 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 CHMP1AQ9HD42 196 aaPredicted RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 TREM1Q9NP99 234 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 FXYD6-FXYD2A0A087WZ82 144 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 A0A1W2PPW3 197 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 DGKGP49619 791 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 DNASE1L3Q13609 305 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 DCAF12L1Q5VU92 463 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 GALNT13Q8IUC8 556 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 AURKBQ96GD4 344 aaPredicted RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 COL21A1Q96P44 957 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 HEPHQ9BQS7 1158 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 LIN28AQ9H9Z2 209 aaKnown RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 FBXW2Q9UKT8 454 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 PCDHGC4Q9Y5F7 938 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 A8MT66 165 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 OR1F1O43749 312 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 SNAPC5O75971 98 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 GSTM3P21266 225 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 SPATS1Q496A3 300 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 RAB12Q6IQ22 244 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 ARL14EPQ8N8R7 260 aaPredicted RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 BPIFB1Q8TDL5 484 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 METTL21AQ8WXB1 218 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 GEMIN6Q8WXD5 167 aaKnown RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 SMOC2Q9H3U7 446 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 LRP5O75197 1615 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 L7N2F9 121 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 RB1P06400 928 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 HAPLN1P10915 354 aaPredicted RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 GRK5P34947 590 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 OR3A3P47888 321 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 OR3A2P47893 321 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 SLC11A1P49279 550 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 GRSF1Q12849 480 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNPH-201ENST00000381867 GALNT6Q8NCL4 622 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 RAD9AQ99638 391 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 RNF6Q9Y252 685 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 NEMP2A6NFY4 417 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 YJEFN3A6XGL0 299 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 IL7RP16871 459 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 GNAZP19086 355 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 RPL6Q02878 288 aaKnown RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 ZNF33AQ06730 810 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 ILF3Q12906 894 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNPH-201ENST00000381867 TGFBIQ15582 683 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 TNFAIP8L2Q6P589 184 aaPredicted RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 LINGO4Q6UY18 593 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 TBX5Q99593 518 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 POLMQ9NP87 494 aaPredicted RBP13.62□□□□□ -0.23
SNPH-201ENST00000381867 IL23AQ9NPF7 189 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
SNPH-201ENST00000381867 A0A1W2PRQ8 180 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 ZNF823P16415 610 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 RYKP34925 604 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 NSG1P42857 185 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 VEGFBP49765 207 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 NFKB2Q00653 900 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 CCDC28AQ8IWP9 274 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 CFAP206Q8IYR0 622 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 FCRL5Q96RD9 977 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 FUZQ9BT04 418 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 GTPBP2Q9BX10 602 aaKnown RBP13.61□□□□□ -0.23
SNPH-201ENST00000381867 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 HSPB11Q9Y547 144 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 COLEC10Q9Y6Z7 277 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
SNPH-201ENST00000381867 ZNF487B1APH4 448 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms