RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TIGD6Q17RP2 521 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 LRP10Q7Z4F1 713 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MRPL52Q86TS9 123 aaKnown RBP4.77□□□□□ -1.65
PTPRD-203ENST00000381196 MYOCQ99972 504 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 FAM83DQ9H4H8 585 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 NBASA2RRP1 2371 aa4.77□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3DA0A087WVF3 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3IA0A087WXS9 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3EA0A087X179 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3KA0A087X1G2 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3FA6NER0 549 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ANKRD61A6NGH8 418 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3LB9A6J9 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 RFPL3O75679 317 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3HP0C7X1 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF806P0C7X5 589 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CYP2F1P24903 491 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CDKN2BP42772 138 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 PCDH1Q08174 1060 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3GQ6DHY5 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3CQ6IPX1 549 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TBC1D3Q8IZP1 549 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-203ENST00000381196 B3GALNT2Q8NCR0 500 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 FAM46DQ8NEK8 389 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OR13F1Q8NGS4 319 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 PIGMQ9H3S5 423 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 NT5MQ9NPB1 228 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 POLE4Q9NR33 117 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ASH2LQ9UBL3 628 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CACFD1Q9UGQ2 172 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 NME7Q9Y5B8 376 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SNX10Q9Y5X0 201 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 KIAA1217Q5T5P2 1943 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 GNG14A0A1W2PPG7 69 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TCRBV3S1A0A5B6 114 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 PRSS44E7EML9 344 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CDC7O00311 574 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 E2F3O00716 465 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 XPNPEP2O43895 674 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SLC1A2P43004 574 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SPIN4Q56A73 249 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF311Q5JNZ3 666 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 FNBP1LQ5T0N5 605 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM164Q5U3C3 297 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 BLOC1S3Q6QNY0 202 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 MOB2Q70IA6 237 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 VN1R5Q7Z5H4 357 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SIAH1Q8IUQ4 282 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 IZUMO1Q8IYV9 350 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TTLQ8NG68 377 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 FATE1Q969F0 183 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 KCNS3Q9BQ31 491 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 IDI2Q9BXS1 227 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 DNTTIP1Q9H147 329 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 AGO4Q9HCK5 861 aaKnown RBP4.76□□□□□ -1.65
PTPRD-203ENST00000381196 AGAP14A8MT82 685 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 GMDSO60547 372 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SEC14L2O76054 403 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CSF1P09603 554 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CXCL8P10145 99 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ZP3P21754 424 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 IDUAP35475 653 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ABHD18Q0P651 414 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 DUSP6Q16828 381 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 MYLK3Q32MK0 819 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TEX30Q5JUR7 227 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 REP15Q6BDI9 236 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 KDELC1Q6UW63 502 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CUZD1Q86UP6 607 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TMC8Q8IU68 726 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 AVL9Q8NBF6 648 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 GSTCDQ8NEC7 633 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OR6Q1Q8NGQ2 317 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 AGAP2Q99490 1192 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SLC6A7Q99884 636 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 DEC1Q9P2X7 70 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF232Q9UNY5 417 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 PMF1-BGLAPU3KQ54 211 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 XIRP1Q702N8 1843 aaKnown RBP4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OR6C75A6NL08 312 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 MT-ND1P03886 318 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 NOS3P29474 1203 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 CDH11P55287 796 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 RAB39AQ14964 217 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 LAPTM4AQ15012 233 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 PFKFB4Q16877 469 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OR2T5Q6IEZ7 315 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ALKBH2Q6NS38 261 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OAFQ86UD1 273 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 MS4A15Q8N5U1 240 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ZSCAN1Q8NBB4 408 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF248Q8NDW4 579 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OR2T29Q8NH02 315 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 OR8D1Q8WZ84 308 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 UHRF1Q96T88 793 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-203ENST00000381196 TCF25Q9BQ70 676 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SLC25A32Q9H2D1 315 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SPANXA1Q9NS26 97 aa4.76□□□□□ -1.65
PTPRD-203ENST00000381196 SCML1Q9UN30 329 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms