RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 TGM7Q96PF1 710 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 HBEGFQ99075 208 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 RTKNQ9BST9 563 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 KLHL3Q9UH77 587 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 ENTPD2Q9Y5L3 495 aa13.57□□□□□ -0.24
HERPUD1-203ENST00000379792 FEZF1A0PJY2 475 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 SLC30A4O14863 429 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 CAPN5O15484 640 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 KIF1CO43896 1103 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 MAGP20916 626 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 HMOX2P30519 316 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 GRIA3P42263 894 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 HTR6P50406 440 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 NEK2P51955 445 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 CSNK1G2P78368 415 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 CCL7P80098 99 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 ABATP80404 500 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 CFHR1Q03591 330 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 NR1D2Q14995 579 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 INAVAQ3KP66 663 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 UGT3A2Q3SY77 523 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 VWA5B1Q5TIE3 1220 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 KANK2Q63ZY3 851 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 ADNP2Q6IQ32 1131 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 ERMP1Q7Z2K6 904 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 MAVSQ7Z434 540 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 RNF175Q8N4F7 328 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 IFI44Q8TCB0 444 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 CCT8L2Q96SF2 557 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 CCDC3Q9BQI4 270 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 TMEM9Q9P0T7 183 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 TRPS1Q9UHF7 1281 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 POMT2Q9UKY4 750 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 ATXN7L1Q9ULK2 861 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 STK38LQ9Y2H1 464 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 ASXL3Q9C0F0 2248 aa13.56□□□□□ -0.24
HERPUD1-203ENST00000379792 MATN2O00339 956 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 MANBAO00462 879 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 SNUPNO95149 360 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 ENO1P06733 434 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 UROSP10746 265 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 JUPP14923 745 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 CASP2P42575 452 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 PCDH1Q08174 1060 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 SLC14A1Q13336 389 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 PCM1Q15154 2024 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 TBCCQ15814 346 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 SLC5A12Q1EHB4 618 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 LIPJQ5W064 366 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 GRHL2Q6ISB3 625 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 FAM129CQ86XR2 697 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 NAXDQ8IW45 347 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 OR6C4Q8NGE1 309 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 NAT6Q93015 286 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 MAP3K3Q99759 626 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 NUF2Q9BZD4 464 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 TUBB1Q9H4B7 451 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 SYNDIG1Q9H7V2 258 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 PRM3Q9NNZ6 103 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 FTSJ1Q9UET6 329 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 ZNF490Q9ULM2 529 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 USH1CQ9Y6N9 552 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 ZNF195O14628 629 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 DUX1O43812 170 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 LINC00032P0C843 101 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 PCNAP12004 261 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 CKMT2P17540 419 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 CDH3P22223 829 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 CSF2RBP32927 897 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 AQP5P55064 265 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 BTKQ06187 659 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 ABRAXAS2Q15018 415 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 RBBP5Q15291 538 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 SNAP47Q5SQN1 464 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 FIGLAQ6QHK4 219 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 TWIST2Q8WVJ9 160 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 WDR34Q96EX3 536 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 TRIM55Q9BYV6 548 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 NSRP1Q9H0G5 558 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 EHD1Q9H4M9 534 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 PELI2Q9HAT8 420 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 TMEM184CQ9NVA4 438 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 SNX7Q9UNH6 387 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 DCHS1Q96JQ0 3298 aa13.55□□□□□ -0.24
HERPUD1-203ENST00000379792 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-203ENST00000379792 RP1P56715 2156 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms