RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 HOXC11O43248 304 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 TBL1XO60907 577 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 NAT2P11245 290 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 GKP32189 559 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 OR1D2P34982 312 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 NFATC2Q13469 925 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 KDM4DQ6B0I6 523 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 TRIM46Q7Z4K8 759 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 BCL7CQ8WUZ0 217 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 IPCEF1Q8WWN9 437 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 FAM120BQ96EK7 910 aaKnown RBP16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 MYOCQ99972 504 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 IL26Q9NPH9 171 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 LATS2Q9NRM7 1088 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 PCDHGA3Q9Y5H0 932 aa16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 MN1Q10571 1320 aaPredicted RBP16.12■□□□□ 0.17
PCDHA1-201ENST00000378133 PDZK1P1A8MUH7 402 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 CLDN7O95471 211 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 APOA1P02647 267 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 GALTP07902 379 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 BCKDHAP12694 445 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 EPHA2P29317 976 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 DEFA1P59665 94 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 DEFA3P59666 94 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 ARHGEF7Q14155 803 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 CPSF6Q16630 551 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 TSPYL5Q86VY4 417 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 ANKRD46Q86W74 232 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 DBF4BQ8NFT6 615 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 C2orf15Q8WU43 125 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 MYO19Q96H55 970 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 DDX28Q9NUL7 540 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 FBXO9Q9UK97 447 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 NDRG4Q9ULP0 352 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 RNF6Q9Y252 685 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 MANBAO00462 879 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 MED26O95402 600 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 B3GALT4O96024 378 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 EPB42P16452 691 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 HMGA1P17096 107 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 GADD45AP24522 165 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 PRKCDQ05655 676 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 USP39Q53GS9 565 aaKnown RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 INO80DQ53TQ3 878 aaPredicted RBP16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 C11orf74Q86VG3 221 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 ZBTB2Q8N680 514 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 QPCTLQ9NXS2 382 aa16.11■□□□□ 0.17
PCDHA1-201ENST00000378133 ZNF682O95780 498 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 EBLN1P0CF75 366 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 RPS3P23396 243 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 GPRC6AQ5T6X5 926 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 SNX20Q7Z614 316 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 RNF180Q86T96 592 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 NTMT1Q9BV86 223 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CDADC1Q9BWV3 514 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 GABARAPL1Q9H0R8 117 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 C1orf109Q9NX04 203 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 TRPM5Q9NZQ8 1165 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 AP3M1Q9Y2T2 418 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 DSCR3O14972 297 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ZW10O43264 779 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 IL1RNP18510 177 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 EFNA1P20827 205 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CTSKP43235 329 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 VEGFBP49765 207 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 OR2B6P58173 313 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 SEMG2Q02383 582 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 PROX2Q3B8N5 592 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 PRSS36Q5K4E3 855 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ATG9BQ674R7 924 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 OR2T5Q6IEZ7 315 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ADGRG2Q8IZP9 1017 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CHCHD4Q8N4Q1 142 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 OR6F1Q8NGZ6 308 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 OR2T29Q8NH02 315 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 WFDC5Q8TCV5 224 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CD99L2Q8TCZ2 262 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 INPP5KQ9BT40 448 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 PDP1Q9P0J1 537 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ABCG2Q9UNQ0 655 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 DLGAP4Q9Y2H0 992 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 PCDHGB6Q9Y5F9 930 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 A3GALT2U3KPV4 340 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CASP8AP2Q9UKL3 1982 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 TRBV5-3A0A0A0MS03 114 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 FAM220BPB1ANY3 271 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 PER2O15055 1255 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 KMOO15229 486 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 SMAD6O43541 496 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 HOXB6P17509 224 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ITGALP20701 1170 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CSKP41240 450 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 MRPS15P82914 257 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ATAD3CQ5T2N8 411 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 NLGN4XQ8N0W4 816 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ASCC1Q8N9N2 400 aaKnown RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 OR7G1Q8NGA0 311 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 KLF16Q9BXK1 252 aaPredicted RBP16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 ACPTQ9BZG2 426 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms