RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 EIF4HQ15056 248 aaKnown RBP10.54□□□□□ -0.72
HIF3A-205ENST00000377670 NR0B2Q15466 257 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 CRTC1Q6UUV9 634 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF527Q8NB42 609 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 OR5M3Q8NGP4 307 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 PTGES2Q9H7Z7 377 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 RC3H2Q9HBD1 1191 aaKnown RBP10.54□□□□□ -0.72
HIF3A-205ENST00000377670 HS3ST4Q9Y661 456 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 CFAP20Q9Y6A4 193 aaKnown RBP10.54□□□□□ -0.72
HIF3A-205ENST00000377670 PIRO00625 290 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 B4GALT2O60909 372 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 ASMTP46597 345 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 SCN1BQ07699 218 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 RBBP4Q09028 425 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 PTPRCAPQ14761 206 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 CYP1B1Q16678 543 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 TNFAIP8L3Q5GJ75 292 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 MORN1Q5T089 497 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 PLXDC1Q8IUK5 500 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 PJA1Q8NG27 643 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 GPR151Q8TDV0 419 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 JPH3Q8WXH2 748 aaPredicted RBP10.54□□□□□ -0.72
HIF3A-205ENST00000377670 CENPNQ96H22 339 aaPredicted RBP10.54□□□□□ -0.72
HIF3A-205ENST00000377670 FEM1AQ9BSK4 669 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
HIF3A-205ENST00000377670 PLK4O00444 970 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 GRID2O43424 1007 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 FHP07954 510 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 NCK1P16333 377 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 LIPEQ05469 1076 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PNPT1Q8TCS8 783 aaKnown RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 APOLD1Q96LR9 279 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 POMPQ9Y244 141 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TCAF1Q9Y4C2 921 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TBX1O43435 398 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CLDN9O95484 217 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CAPZA1P52907 286 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PGGT1BP53609 377 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TDGQ13569 410 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 NADK2Q4G0N4 442 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CXorf57Q6NSI4 855 aaKnown RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 SPATA19Q7Z5L4 167 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CLIP4Q8N3C7 705 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF599Q96NL3 588 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 MIPEPQ99797 713 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 FAM117AQ9C073 453 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 DSN1Q9H410 356 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 SLC2A6Q9UGQ3 507 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PDE10AQ9Y233 779 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PRELID1Q9Y255 219 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 SPIN1Q9Y657 262 aaPredicted RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 C2orf74A8MZ97 194 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TP53I11O14683 189 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ITGB1P05556 798 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ASGR2P07307 311 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 THEGLP0DJG4 465 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 SAGP10523 405 aaPredicted RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PRDX6P30041 224 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 HEPACAMQ14CZ8 416 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 SF3B4Q15427 424 aaKnown RBP eCLIP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 MANEAQ5SRI9 462 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF781Q8N8C0 355 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 NAT8LQ8N9F0 302 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 OR2AJ1Q8NGZ0 328 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TMEM109Q9BVC6 243 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CPEB1Q9BZB8 566 aaKnown RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 MARK1Q9P0L2 795 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PRAMEF33A0A0G2JMD5 474 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PRAMEF10O60809 474 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 IPO13O94829 963 aaKnown RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 H6PDO95479 791 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PGRP06401 933 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 POLR2CP19387 275 aaPredicted RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 AHCYP23526 432 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TUBA4AP68366 448 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF542PQ5EBM4 170 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PIM3Q86V86 326 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
HIF3A-205ENST00000377670 ZNF570Q96NI8 536 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 DEFB126Q9BYW3 111 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 GDAP2Q9NXN4 497 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TBC1D24Q9ULP9 559 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 IRAK3Q9Y616 596 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TJP1Q07157 1748 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 IGKV6D-21A0A0A0MT36 114 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 HBQ1P09105 142 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CHIT1Q13231 466 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 C14orf80Q86SX3 495 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 OAFQ86UD1 273 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 TP53INP2Q8IXH6 220 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CNTD1Q8N815 330 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 PEX16Q9Y5Y5 336 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
HIF3A-205ENST00000377670 NDUFS4O43181 175 aa10.52□□□□□ -0.72
HIF3A-205ENST00000377670 MTX2O75431 263 aa10.52□□□□□ -0.72
HIF3A-205ENST00000377670 FBLP22087 321 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms